Extended Data Fig. 2: Quality control of the snMultiome data. | Nature

Extended Data Fig. 2: Quality control of the snMultiome data.

From: Molecular and cellular dynamics of the developing human neocortex

Extended Data Fig. 2

a, Violin plots, box plots, barplots, and UMAP plots of several quality control metrics for evaluating the quality of individual samples in the snMultiome data, including numbers of unique molecular identifiers (# UMIs), numbers of identified genes (# genes), number of fragments in ATAC peaks, transcription start site (TSS) enrichment scores, and proportion of individual cell types in each sample. The legend for cell types can be found in panel b. b, UMAP plots of cells from individual snMultiome datasets separated by age groups. c, UMAP plots generated based on RNA or ATAC data only. The legend can be found in panel a.

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