Table 2 Sequencing primer list
Fragment | Primer name | Sequence (5′–3′) |
|---|---|---|
gF1 | cov-1V | ATTAAAGGTTTATACCTTCCCAGG |
cov-655V | AGCTGGTGGCCATAGTTAC | |
cov-1321V | AGGTGCCACTACTTGTGG | |
cov-1925V | CTGCTCAAAATTCTGTGCG | |
cov-2572V | CTACTAGTGAAGCTGTTGAAGC | |
cov-3225V | CTGTTGGTCAACAAGACGG | |
cov-528R | AGCTCAACCATAACATGACC | |
gF2 | cov-3225V | CTGTTGGTCAACAAGACGG |
cov-3824V | GTTTCAAGCTTTTTGGAAATG | |
cov-4431V | TGCCTGTCTGTGTGGAAAC | |
cov-4990V | CAACATTAACCTCCACACGC | |
cov-5525V | ACTTGTGGACAACAGCAG | |
cov-6109V | GAAACCTGCTTCAAGAGAG | |
cov-6737V | ACACGGTGTTTAAACCGTG | |
cov-7382V | CAAATGGCCCCGATTTCAG | |
gF3 | cov-7382V | CAAATGGCCCCGATTTCAG |
cov-7930V | TCAGCGTCTGTTTACTACAG | |
cov-8481V | CTTTTAAGTTGACATGTGCAAC | |
cov-8995V | ATCAGCTTGTGTTTTGGC | |
cov-9534V | CTGTACTCTGTTTAACACC | |
cov-10094V | GAGGGTTGTATGGTACAAG | |
cov-10680V | ACGCTGCTGTTATAAATGG | |
cov-11188V | ACCTTCTCTTGCCACTG | |
cov-11707V | AGTTTCTACACAGGAGTTTAG | |
gF4 | cov-11707V | AGTTTCTACACAGGAGTTTAG |
cov-12205V | GAAGAAGTCTTTGAATGTGG | |
cov-12806V | GTACTTGCACTGTTATCCG | |
cov-13441V | GTCAGCTGATGCACAATCG | |
cov-14062V | GATAATCAAGATCTCAATGG | |
cov-14618V | CTACGTGCTTTTCAGTAG | |
gF5 | cov-14618V | CTACGTGCTTTTCAGTAG |
cov-15170V | ATCAATAGCCGCCACTAG | |
cov-15677V | ACGCATATTTGCGTAAAC | |
cov-16273V | TCATTAAGATGTGGTGCTTG | |
cov-16853V | GTGATGCTGTTGTTTACCG | |
cov-17444V | CTCAATTACCTGCACCAC | |
cov-18037V | AAGCTGAAAATGTAACAGG | |
gF6 | cov-18037V | AAGCTGAAAATGTAACAGG |
cov-18588V | TGTCTTATGGGCACATGG | |
cov-19211V | GATATCCTGCTAATTCCATTG | |
cov-19840V | ATTTGGGTGTGGACATTG | |
cov-20459V | AACAGATGCGCAAACAGG | |
cov-20934V | TACGCTGCTTGTCGATTC | |
cov-21521V | TGTTATTTCTAGTGATGTTCTTG | |
gF7 | cov-21521V | TGTTATTTCTAGTGATGTTCTTG |
cov-22092V | TGGACCTTGAAGGAAAAC | |
cov-22685V | TCCACTTTTAAGTGTTATGGAG | |
cov-23203V | AGGCACAGGTGTTCTTAC | |
cov-23840V | GTACACAATTAAACCGTGC | |
cov-24428V | CACAAGCTTTAAACACGC | |
cov-25068V | TCTCTGGCATTAATGCTTC | |
gF8 | cov-25068V | TCTCTGGCATTAATGCTTC |
cov-25624V | CACTTTGTTTGCAACTTGC | |
cov-26245V | CATTCGTTTCGGAAGAGAC | |
cov-26778V | GTCTTGTAGGCTTGATGTG | |
cov-27372V | ATGGAGATTGATTAAACGAAC | |
cov-27875V | TTGTCACGCCTAAACGAAC | |
cov-25068V | TCTCTGGCATTAATGCTTC | |
gF9 | cov-27875V | TTGTCACGCCTAAACGAAC |
cov-28404V | GTTTACCCAATAATACTGCG | |
cov-28994V | CAACAAGGCCAAACTGTC | |
cov-29611V | GTGCAGAATGAATTCTCG | |
F7-AvrII-R | GAAGTCCAGCTTCTGGCC |
