Table 8 Statistics of repetitive sequences in the fat greenling.
From: A Chromosomal-level genome assembly and annotation of fat greenling (Hexagrammos otakii)
Type | Length (Bp) | % in genome | Length (Bp) | % in genome | Length (Bp) | % in genome | Length (Bp) | % in genome |
|---|---|---|---|---|---|---|---|---|
DNA | 66297392 | 9.72 | 3027360 | 0.44 | 153801656 | 22.54 | 203084087 | 29.76 |
LINE | 20190728 | 2.96 | 9864976 | 1.45 | 53012281 | 7.77 | 65501248 | 9.60 |
SINE | 4158128 | 0.61 | 0 | 0 | 3455517 | 0.51 | 6889820 | 1.01 |
LTR | 16190027 | 2.37 | 3759085 | 0.55 | 28533170 | 4.18 | 42195939 | 6.18 |
Satellite | 5525756 | 0.81 | 0 | 0 | 6704413 | 0.98 | 11887072 | 1.74 |
Simple_repeat | 0 | 0 | 0 | 0 | 8732125 | 1.28 | 8732125 | 1.28 |
Other | 3992 | 0 | 63 | 0 | 0 | 0 | 4055 | 0 |
Unknown | 732739 | 0.11 | 10629 | 0 | 20555047 | 3.01 | 21285979 | 3.12 |
Total | 100080051 | 14.67 | 16645016 | 2.44 | 228746265 | 33.52 | 278406157 | 40.80 |
