Table 4 Brief summary of functional annotation.

From: Comprehensive genome annotation of Trilocha varians, a new model species of Lepidopteran insects

 

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total

EggNOG

TrEMBL

Swiss-prot

EggNOG**

InterPro

aligned

Informative

12759

11961

7735

10786

13007

Annotated***

14481

Uninformative*

0

2160

183

3095

—

unaligned

3507

2145

8348

2385

3259

Unannotated***

1785

  1. *When the query sequences were aligned to sequences whose description contains any of conserved/predicted/unnamed/hypothetical/putative/unidentified/uncharacterized/unknown/uncultured/uninformative, such alignment was categorized as “uninformative”, and the query sequence was treated as an unannotated sequence.
  2. **In this column, queries with at least one GO term were treated as “Informative”, while queries without GO terms were treated as “Uninformative”. “Unaligned” in this column means queries without protein family assignment.
  3. ***“Annotated” means at least one match yielded from any the of databases. “Unannotated” means no match yielded from all databases.
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