Table 5 Summary statistics of the numbers of predicted protein coding genes in the assembled genome of Engraulis japonicus.
From: Chromosome-level genome assembly and annotation of Japanese anchovy (Engraulis japonicus)
Gene/Database | Gene | mRNA | ||
|---|---|---|---|---|
Number | Percent (%) | Number | Percent (%) | |
Total | 24,405 | 100 | 32,891 | 100 |
Annotated | 23,709 | 97.15 | 31,830 | 96.77 |
NR | 23,506 | 96.32 | 31,571 | 95.99 |
SwissProt | 20,670 | 84.7 | 28,058 | 85.31 |
TrEMBL | 23,407 | 95.91 | 31,450 | 95.62 |
KOG | 18,943 | 77.62 | 25,849 | 78.59 |
TF | 5,432 | 22.26 | 7,331 | 22.29 |
InterPro | 22,202 | 90.97 | 29,764 | 90.49 |
GO | 16,628 | 68.13 | 22,251 | 67.65 |
KEGG_ALL | 23,169 | 94.94 | 31,117 | 94.61 |
KEGG_KO | 16,500 | 67.61 | 22,413 | 68.14 |
Pfam | 20,745 | 85 | 27,776 | 84.45 |
Unannotated | 696 | 2.85 | 1,061 | 3.23 |
