Table 9 Coverage statistics of PacBio HiFi long reads and Illumina short reads.
From: Chromosome-level genome assembly and annotation of Japanese anchovy (Engraulis japonicus)
Data | Items | Result |
|---|---|---|
PacBio HiFi long reads | Reads mapping rate (%) | 99.91 |
Genome average sequencing depth (×) | 31.92 | |
Coverage of genome (%) | 99.95 | |
Coverage of genome >4 × (%) | 95.48 | |
Coverage of genome >10 × (%) | 81.79 | |
Coverage of genome >20 × (%) | 61.23 | |
Illumina short reads | Reads mapping rate (%) | 97.97 |
Genome average sequencing depth (×) | 64.36 | |
Coverage of genome (%) | 99.60 | |
Coverage of genome > 4 × (%) | 97.79 | |
Coverage of genome > 10 × (%) | 92.39 | |
Coverage of genome > 20 × (%) | 84.66 |
