Table 3 Description of columns in the file ‘species.csv’ that contains information on the species found with SIBES.
SPECIES.CSV | |
|---|---|
column | description |
sibes_id | unique identifier assigned to a specific taxon |
name | scientific name |
short_name | abbreviated scientific name |
aphia_id | identifier of species in WoRMS - World Register of Marine Species: www.marinespecies.org |
taxonomic_group | taxonomic group: bivalve, crustacea, echinodermata, gastropoda, nemertea, oligochaeta, phoronida, polychaete, polyplacophora, and pycnogonida |
taxonomic_indentification_level | finest level of guaranteed taxonomic identification |
year_added | the year the species or group was included |
occurance | number of samples the species was present |
occupancy | percentage of samples the species was present |
weight_is_measured | whether the weight is measured: TRUE or FALSE |
length_measuring_method_id | method to measure length: 1 = maximum distance on the anterior-posterior axis, 2 = distance between rostrum and tale, 3 = maximum width of carapace, 4 = maximum length of the longest arms, 5 = width of the disc, 6 = max length |
min_shell_length_to_separate_flesh | minimum shell length to separate shell and flesh for bivalves |
missing_afdm_method_id | method to predict missing AFDM measurements: 12 = average, 24 = LOESS, 25 = average historical value |
remarks | remarks on species and taxonomic grouping |
