Fig. 2 | Scientific Data

Fig. 2

From: Single-cell assay for transposase-accessible chromatin sequencing of human clear cell renal cell carcinoma

Fig. 2

Data integration and quality control (QC) of the three ccRCC samples. (a,b) Performing transcriptional start site (TSS) enrichment score and the nucleosome signal (NS) of the data. (c) We showed the quality parameters of each cell nucleus by scatterplot. (d) A quality control strategy is applied to the data, with the blue dots representing cells and the cells in the red box being high-quality cells for downstream analysis. (e) We showed the correlation between depth and reduced dimension components from 1 to 50 by latent semantic indexing (LSI) analysis.

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