Table 2 The genome assembly and annotation results of Atrijuglans aristata.
From: Chromosome-level genome assembly of a specialist walnut pest Atrijuglans aristata
Features | Value |
|---|---|
Assembly | |
Genome size (Mb) | 480.99 |
No. of chromosomes | 31 |
GC content (%) | 36.48 |
Contig N50 (Mb) | 2.68 |
Scaffold N50 (Mb) | 16.01 |
BUSCO completeness (genome) | 95.6% |
Annotation | |
Repeats (%) | 48.17 |
Retroelements (%) | 15.70 |
DNA transposons (%) | 26.03 |
Unclassified (%) | 5.30 |
Simple repeats (%) | 0.93 |
Low complexity (%) | 0.12 |
No. of protein-coding genes | 22,542 |
No. of genes for a complete ORF | 21,233 |
BUSCO completeness (protein-coding genes) | 94.3% |
Function annotation by eggNOG | 14,966 |
Function annotation by InterProScan | 18,128 |
Function annotation via eggNOG and InterProScan | 19,167 |
