Fig. 3
From: Chromosome-level reference genome assembly for the protected resource plant, Zenia insignis
The chromosome and plastid information of Zenia insignis. (A) The interaction heat map of Hi-C among chromosomes for the Zenia insignis genome. The Hi-C interaction matrix shows the pairwise correlations among the 14 pseudomolecules, and the presence of a red colouration is indicative of an interaction between the sequences, with the shade of red denoting the magnitude of this interaction. (B) The high-quality genomic landscape of Zenia insignis. The genome diagram has four circles from the outside: gene density, GC content, chromosomal length, and intraspecies collinearity. (C) The visualization of the plastid genome of Zenia insignis using OGDRAW. The outside circle displays genes color-coded according to their functional groups. The second circle illustrates the large single-copy (LSC), inverted repeat (IRA, IRB), and small single-copy (SSC) regions. The third circle delineates the percentage of GC content and genomic positions in kilobase pairs. (D) Compared analysis of plastid for Zenia insignis. Gene(green), CDS (yellow), RNA (red), and IR regions (grey) have been color-coded according to their functional groups. The identity of the two plastid genomes sequences exhibited high overall similarity, except for some regions in non-coding regions.
