Table 2 Comparison of genome assembly and scaffolding statistics for C. grayii across different stages of the assembly pipeline.
From: A chromosome-level genome assembly of Gray’s grenadier anchovy, Coilia grayii
Statistical level | Procedure | ||
|---|---|---|---|
Hifiasm assembly | Purge_dups | Hi-C scaffolding | |
Total length(bp) | 1,666,332,897 | 920,649,896 | 920,769,796 |
Number of contig | 4,664 | 1,153 | / |
Contig N50 | 1,899,545 | 2,901,349 | / |
Contig N90 | 159,135 | 432,881 | / |
Number of scaffold | / | / | 619 |
scaffold N50 | / | / | 36,449,184 |
scaffold N90 | / | / | 29,186,287 |
Protein-coding genes | 29,496 (29,395 annotated, 99.66%) | ||
