Table 3 Statistics of repeat sequences in the Ficus benjamina genome.
Class | Count | Length (bp) | % of genome |
|---|---|---|---|
LTR | 72,520 | 87,774,781 | 24.20 |
Copia | 18,135 | 15,812,250 | 4.36 |
Gypsy | 54,250 | 70,811,953 | 19.52 |
unknown | 135 | 1,150,578 | 0.32 |
TIR | 102,095 | 30,803,550 | 8.49 |
CACTA | 29,014 | 8,375,133 | 2.31 |
Mutator | 55,563 | 17,628,292 | 4.86 |
PIF_Harbinger | 7,399 | 1,952,201 | 0.54 |
Tc1_Mariner | 4,772 | 994,082 | 0.27 |
hAT | 5,347 | 1,853,842 | 0.51 |
nonTIR | 50,501 | 14,667,777 | 4.04 |
Helitron | 50,501 | 14,667,777 | 4.04 |
Total | 225,116 | 133,246,108 | 36.73 |