Table 4 Genome assembly and annotation statistics of Kibakoganea sinica.
From: A chromosomal-level genome assembly of Kibakoganea sinica, Bouchard, 2005 (Coleoptera: Scarabaeidae)
Characteristics | K. sinica |
|---|---|
Genome assembly | |
Genome Size (Mb) | 601.44 |
Number of scaffolds | 23 |
Number of chromosomes | 10 |
Scaffold N50 length (Mb) | 60.23 |
GC (%) | 34.81 |
BUSCO completeness (%) | 99.0 |
Protein-coding genes | |
Number | 12,940 |
Mean gene length (bp) | 14,792.6 |
BUSCO completeness (%) | 99.1 |
Repetitive elements | |
Size (Mb) | 267.24 (44.43%) |
DNA transposons (Mb) | 102.28 (17.00%) |
LINEs (Mb) | 40.96 (6.81%) |
LTRs (Mb) | 8.53 (1.41%) |
Unclassified (Mb) | 108.83 (18.09%) |
ncRNA | |
Number of ncRNA | 596 |
tRNA | 312 |
rRNA | 101 |
miRNA | 74 |
snRNA | 69 |
lncRNA | 2 |
sRNA | 1 |
Function annotation | |
Number of genes matching Uniprot records | 12,419 |
Number of genes with InterProScan annotations | 11,277 |
Number of genes with eggNOG annotations | 12,115 |
Number of genes with COG Functional Categories combining InterProScan and eggNOG results | 11,414 |
Number of genes with GO items combining InterProScan and eggNOG results | 10,333 |
Number of genes with KEGG pathways items combining InterProScan and eggNOG results | 5,009 |
