Table 2 Assembly statistics of the allotetraploid oyster genome.
From: Chromosomal-level genome assembly of an allotetraploid oyster
Genome name | Before Hi-C | After Hi-C | |
|---|---|---|---|
Seq type | Contig | Contig | Scaffold |
Total number | 1,610 | 717 | 154 |
Total length (bp) | 1,815,363,755 | 1,230,335,771 | 1,230,392,071 |
N50 (bp) | 2,286,716 | 2,556,815 | 57,216,236 |
N90 (bp) | 595,812 | 800,866 | 33,756,945 |
Max length (bp) | 20,754,625 | 20,754,625 | 70,568,214 |
Gap number | / | 563 | / |
GC content (%) | 33.54 | 33.49 | 33.49 |
