Table 7 The comparison of gene models predicted from the allotetraploid oyster, Pacific oyster (C. gigas) and Portuguese oyster (C. angulata).
From: Chromosomal-level genome assembly of an allotetraploid oyster
Statistics | Allotetraploid oyster | C. gigas (GCF_963853765.1) | C. angulata (GCA_025765675.3) |
|---|---|---|---|
Gene Num | 58,330 | 25,923 | 28,211 |
Gene Len | 482,454,743 | 330,861,862 | 209,012,942 |
Ave Gen Len | 8,271 | 12,763 | 7,409 |
Exon Len | 109,046,919 | 44,765,190 | 42,907,275 |
Ave Exon Len | 1,869 | 1,727 | 1,521 |
Exon Num | 457,043 | 218,906 | 217,883 |
Ave Exon Num | 7.84 | 8.44 | 7.72 |
CDS Len | 95,082,579 | 44,765,190 | 42,907,275 |
Ave CDS Len | 1,630 | 1,727 | 1,521 |
CDS Num | 450,163 | 218,906 | 217,883 |
Ave CDS Num | 7.72 | 8.44 | 7.72 |
Intron Len | 373,407,824 | 286,096,672 | 166,105,667 |
Ave Intron Len | 6,402 | 11,036 | 5,888 |
Intron Num | 398,713 | 192,983 | 189,672 |
Ave Intron Num | 6.84 | 7.44 | 6.72 |
