Table 9 Statistical results of short-read (Illumina) and HiFi-reads (PacBio) alignment.
From: Chromosomal-level genome assembly of an allotetraploid oyster
Illumina | PacBio | |
|---|---|---|
Total reads | 1,052,623,204 | 2,123,642 |
Mapped reads | 1,043,076,313 | 2,122,608 |
Mapping rate (%) | 99.09 | 99.95 |
Average sequencing depth (×) | 74 | 17 |
Coverage of genome >1 × (%) | 99.82 | 99.99 |
Coverage of genome >5 × (%) | 99.65 | 97.93 |
Coverage of genome >10 × (%) | 99.42 | 85.57 |
Coverage of genome >20 × (%) | 98.68 | 36.25 |
