Table 1 The main algorithms and software for mature miRNA identification.

From: Adaboost-SVM-based probability algorithm for the prediction of all mature miRNA sites based on structured-sequence features

Algorithm

Species

classifiers

Web server

MatureBayes

Human, Mouse

Naïve Bayes

http://mirna.imbb.forth.gr/MatureBayes.html

MaturePred

Plant

SVM

http://nclab.hit.edu.cn/maturepred/

MiRpara

Human, plant

SVM

http://www.whiov.ac.cn/bioinformatics/mirpara

miRdup

Multiple species

Random forest

http://www.cs.mcgill.ca/_blanchem/mirdup/

miRRim2

Human

 

http://mirrim2.ncrna.org

mirExplorer

Human

Adaboosting

biocenter.sysu.edu.cn/mir/

Microprocessor SVM

Human

SVM

https://demo1.interagon.com/miRNA/

miRmat

vertebrate

Random forest

http://mcube.nju.edu.cn/jwang/lab/soft/MiRmat/

matPred

Human

SVM

Â