Table 2 Comparison between CNVR detected in this study and CNVR reported previously.
From: Genome-wide identification of copy number variations in wrinkled skin cases of Xiang pigs
Platform | Study | Previous reports | Overlap CNVRs | |||
|---|---|---|---|---|---|---|
Breeds | Samples | No. of CNVRs (No. before mapping) | No. of overlapped CNVRs from this study | Ratio of overlapped CNVRs from this study (%) | ||
Next-generation sequencing | Keel et al.49 | 3 | 240 | 3538 | 1617 | 20.49 |
Zheng et al.18 | 2 | 61 | 12,268 | 2152 | 27.26 | |
Bovo et al.50 | 21 | 725 | 3710 | 2129 | 26.97 | |
Paudel et al.51 | 2 | 16 | 2265 (3118) | 797 | 10.10 | |
Jiang et al.52 | 10 | 13 | 1903 (3131) | 1034 | 13.10 | |
Revilla et al.53 | 2 | 7 | 540 (416) | 256 | 3.24 | |
aCGH | Wang et al.54 | 9 | 12 | 988 (1344) | 585 | 7.41 |
Li et al.22 | 9 | 12 | 150 (259) | 73 | 0.92 | |
Wang et al.55 | 9 | 12 | 436 (758) | 247 | 3.13 | |
60 K SNP | Chen et al.21 | 2 | 1693 | 243 (565) | 223 | 2.83 |
Yanan et al.56 | 9 | 302 | 146 (348) | 103 | 1.30 | |
Wiedmann et al.57 | 3 | 1802 | 185 (502) | 147 | 1.86 | |
50 K SNP | Qiu et al.58 | 1 | 5928 | 953 | 1191 | 15.09 |
Ding et al.19 | 1 | 3941 | 695 | 906 | 11.48 | |
80 K SNP | Wang et al.59 | 1 | 857 | 312 | 274 | 3.47 |
This Study | 7893 | |||||
