Abstract
Elephantopus tomentosus (ET) Linn. was reported to be an anti-tumor plant. However, the chemical composition of ET and its anti-tumor compounds and potential mechanisms still unclear. In this paper, UPLC-Q-TOF–MS/MS was firstly used to identified the ingredients in ET and UPLC was used to determine the main compounds of ET. Network pharmacology was applied to predict the potential mechanisms of anti-liver cancer. Anti-tumor nuclear activate compounds and targets of ET were obtained and the anti-liver cancer effect was validated on HepG2. Finally, Molecule docking, RT-qPCR, and western blotting were used for verification of the relationship between nuclear activate compounds and nuclear targets and the potential anti-cancer mechanisms. The result showed that 42 compounds were identified in ET, which consisted of sesquiterpene lactones, flavonoids, and phenylpropanoid compounds. Scabertopin (ST), chlorogenic acid, Isochlorogenic acid B, Isochlorogenic acid A and Isochlorogenic acid C were identified as main compounds and were determined as 0.426%, 0.457%, 0.159%, 0.701%, and 0.103% respectively. 24 compounds showed high pharmacokinetics and good drug-likeness. 520 overlapping targets of the ET compounds and liver cancer were collected. The targets were used for KEGG and GO analysis. GO enrichment analysis suggested that the targets of 24 active compound closed related to promote apoptosis, inhibit proliferation, and regulate oxidative levels. KEGG enrichment analysis suggested that pathway in cancer was enriched most and p38 MAPK/p53 signaling pathway, which closely related to promoting apoptosis and inhibiting proliferation. Compounds-targets analysis based on the parameter of Betweenness, Closeness, Information, Eigenvector, Degree, and component content indicated that ST was the nucleus anti-tumor active compound of ET. HepG2 was first used to validated the anti-tumor effect of ST and the result showed that ST significantly inhibited HepG2 proliferation with a low IC50 less than 5 μM. Nucleus active compound targets, including TP53, CASP3, BCL2, EGFR, TNF-a, IL-1β, and IL-6 were enriched based on degree value of PPI analysis. Molecule docking suggested that ST showed a good combination to TGFBR1 with the combination energy less than − 5 kcal/mol. RT-qPCR result also suggested that ST significantly medicated the mRNA expression level of TP53, CASP3, BCL2, EGFR, TNF-a, IL-1β, and IL-6. Protein expression of p-p38/p38 and p-p53/p53 notable increased by ST treatment. In conclude, combining with UPLC-Q-TOF–MS/MS qualitative analysis, UPLC quantitative analysis, network pharmacology analysis, molecule docking, and in vitro experiments on HepG2, we suggest that ST is an anti-tumor ingredient of ET, which may target to TGFBR1 and promote apoptosis and inhibited proliferation of HepG2 by activating p38 MAPK/p53 signaling pathway. ST can be regarded as a quality marker of ET.
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Introduction
Liver cancer is the sixth most malignancy all over the world and people die of liver cancer is second only to lung cancer. More seriously, incidence rate of liver cancer is getting higher and higher and it will be a societal burden and bring great health challenge to human beings1. Interaction between liver metabolic disease, such as obesity, fatty liver, and cirrhosis, and liver cancer make the treatment of liver cancer more complex2. Meanwhile, inflammatory responses, anomalies in the cell cycle, and immune dysfunction may cause liver cancer singly or in combination3. Current drugs were not satisfactory for liver cancer patients suffering from complex conditions and diverse etiologies disease. Therefore, exploring alternative treatment drugs and methods is still urgent.
Traditional Chinese medicine (TCM) played an important role in combating liver cancer and has attracted more and more attention all over the world. Traditional Chinese medicine adopts a dialectical approach to treatment, which highlights better therapeutic effects in the face of complex diseases. In addition, TCM attenuated toxic and side effects of chemotherapy and radiotherapy. Therefore, TCM was widely used in clinical practice4,5. Therefore, exploring anti-liver cancer drugs from TCM show a widely prospect.
Elephantopus tomentosus Linn (ET) is a traditional medicine similar to Elephantopus scaber Linn, which are widely used to treat cold, hepatitis, bronchitis, fever, the cough associated with pneumonia, and arthralgia in south of China, Hong Kong, Macao and Taiwan areas6,7. Previous research suggested that ET have anti-inflammatory, antibacterial, antiviral, and anticancer activities8,9,10. Since 1970s, American and Japanese scholars have successively discovered sesquiterpene lactones compounds from ET, which show obvious anti-tumor activity11,12. In recent years, more and more scholars played attention to ET and different kinds of compounds of ET has been found and identified and most of the compounds showed significant anti-cancer effect13. Therefore, in this study, the chemical components of ET were analyzed by UPLC-Q-TOF–MS/MS and the main compounds’ content was determined. Network pharmacology was applied to predict the potential mechanisms, nuclear activate compounds and targets of ET and validated on HepG2. Finally, Molecule docking and RT-qPCR were used for verification of the relationship between compounds and targets and the potential anti-cancer mechanisms. Our aim was to explore chemical composition of ET and its anti-liver cancer compounds and potential mechanisms, which finally provide alternative treatment options for liver cancer.
Materials and methods
Materials
Methanol, formic acid, and acetonitrile of MS grade were purchased from Thermo Fisher Scientific (Thermo, United States). Laboratory-deionized water was generated by a Milli-Q water purification system (Millipore, United States). The fresh whole plants of ET were contributed by the Medicinal Botanical Garden of Guangzhou University of Chinese Medicine (Guangzhou, China) in September 2022 and were identified as Elephantopus tomentosus Linn. by Professors Fajin Liu (Guangdong Provincial Engineering Technology Research Institute of Traditional Chinese Medicine, Guangdong, China). ET samples were dried at 45 °C until reaching a constant weight and the voucher specimen (No. ET2022091001) was deposited at Guangdong Province Engineering Technology Research Institute of Traditional Chinese Medicine, Guangzhou, China. The dried ET was grinded into fine powder and stored at – 20 °C before analysis. Primary anti-BCL-2, anti-CASP3, anti-p38, anti-p-p38 anti-p53, and anti-p-p53 were purchased from HuaBio (Hangzhou, China).
The preparation of ET sample solution and standard solution
1.0 g ET powder was accurately weighed and placed into a 150 flat-bottomed conical flask and immersed in 20 mL 70% methanol water. Then, ultrasound extraction was performed for 30 min. Last, ET sample was obtained by filtrating through a 0.22 μm filter membrane. All the standards (≥ 95% purity, HPLC), including, chlorogenic acid, sochlorogenic acid A, isochlorogenic acid B, isochlorogenic acid C, and ST were purchased from Chengdu Herbpurify Co., Ltd (Chengdu, China). The standards were weighted and dissolved in methanol (MS grade) for being analyzed.
UPLC-Q-TOF–MS/MS analysis conditions
Liquid chromatography analysis was performed on a SHIMADZU Exion LC system (Japan) with an Acquity BEH C18 column (100 × 2.1 mm, 1.7 μm, Waters, MA, USA) and the mobile phase consisted of 0.1% formic acid aqueous solution (A) and methanol (B) : 0 ~ 3 min, 5 ~ 20% B; 3 ~ 7 min, 20% ~ 45% B; 7 ~ 12 min, 45% ~ 55% B, 12 ~ 20 min, 55% ~ 70% B, 20 ~ 25 min, 70% ~ 88% B, 25 ~ 27 min, 88% ~ 100% B. The flow rate was 0.25 mL/min with the column temperature fixed at 40 °C and the injection volume was 1.0 μL.
The MS analysis was conducted by using an AB SCIEX X500R Q-TOF–MS/MS system (United States) with an electrospray ionization (ESI). The instrumental settings of Q-TOF–MS/MS were as follows: ion source gas 1 and gas 2 were both 50 psi, curtain gas was 35 psi, ion source temperature was 500 °C, an ion-spray voltage of + 5500/− 4500 V, a declustering potential voltage of 100/− 80 V and a collision energy of ± 35 V, collision energy spread was 15 V. ET Samples were analyzed in both negative and positive ionization modes with scanning mass-to-charge (m/z) range from 100 to 1500. Data was collected in information-dependent acquisition (IDA) mode.
UPLC analysis conditions
UPLC analysis was carried out on a UPLC (2695, Waters, American), connecting with a CORTECS UPLC C18 column (2.1 × 150 mm,1.6 µm, Waters, American). The mobile phase consisted of acetonitrile (B) and 0.1 formic acid aqueous solvent (D) as follows: 0 ~ 5 min, 10 ~ 15% B; 5 ~ 10 min, 15% ~ 20% B; 10 ~ 15 min, 20% ~ 25% B, 15 ~ 20 min, 25% ~ 35% B, 20 ~ 25 min, 35% ~ 95% B, 25 ~ 30 min, 95% ~ 95% B 30 ~ 35 min, 10% ~ 10% B. The flow rate was 0.20 mL/min and the volume temperature fixed at 30 °C. The injection volume was 1.0 µL and the detection wavelength was set at 240 nm.
Network pharmacology
Compounds identified with Pharmacokinetic properties Gatrointestinal absorption as High, and two of druglikeness (Lipinski filter, Ghose filter, Veber filter, Egan filter, and Muegge filter) as high in SwissADME (http://www.swissadme.ch/) or OB ≥ 30% and DL ≥ 0.18 in TCMSP (https://tcmsp-e.com/tcmsp.php) were saved as active ingredients. The active ingredients were submitted to TCMSP (https://tcmsp-e.com/tcmsp.php), HIT (http://www.badd-cao.net:2345/textmining), and SwissTargetPrediction (http://www.swisstargetprediction.ch/, the parameter of probability ≥ 0.10) to figured out the potential targets of ET. Liver cancer potential targets were collected from DisGeNET (https://www.disgenet.org/) database with the Score_gda ≥ 0.10, GeneCards (https://www.genecards.org/) database with relevance score ≥ 10.00, and OMIM (https://omim.org/) database and the union target was obtained for further study. The hub target of compound targets and disease targets was figure out by Venny 2.1.0 (https://bioinfogp.cnb.csic.es/tools/venny/) analysis. Hub targets were input to Cytoscape3.7.0 (https://github.com/cytoscape/cytoscape/releases/3.7.0/)14 to conduct compound-targets network and submitted to STRING (https://cn.string-db.org/) to create a protein–protein interaction (PPI) network. Hub targets were used for Kyto Encyclopedia of Genes and Genomes (KEGG) pathway enrichment15,16,17 and construct Gene Ontology (GO) biological functions enrichment analysis on metascape (https://metascape.org/gp/) database with the conditions of p value less than 0.01, minimum count as 3, and enrichment factor > 1.5.
Nuclear ingredients and targets analysis
The overlapping compounds based on top 20 of Betweenness, Closeness, Information, Eigenvector, and Degree in compound-targets network and component content were regarded as nucleus active compound. Meanwhile, nucleus targets based on top 20 of Betweenness, Closeness, Information, Eigenvector, Degree, and Network in PPI network and Compound-targets network were figured out by venn analysis (https://www.bioinformatics.com.cn/).
Molecular docking analysis
The mol2 or PDB structure format files of the nuclear compounds were downloaded respectively from TCMSP (https://tcmsp-e.com/tcmsp.php) or PubChem (https://pubchem.ncbi.nlm.nih.gov/) database. PDB structure format files of the nuclear compounds were changed into mol2 structure format files by OpenBabel-3.1.1 (http://openbabel.org/). Mol2 structure format files of nuclear compounds were then input into AutoDock version 4.2.6 (https://autodock.scripps.edu/download-autodock4/) to add hydrogens, set as ligand, detect root, choose torsions, and save as “pdbqt” files. Meanwhile, PDB files of nuclear targets were downloaded from PDB database (https://www.rcsb.org/) and submitted to AutoDock version 4.2.6 to delete water, add hydrogens, choose as target, and save as “pdbqt” files. Nuclear compound and target in “pdbqt” files were input into AutoDock version 4.2.6 and a suitable grid box was set and then saved as “gpf” files. The “gpf” files was open in AutoDock version 4.2.6 and carried out “run autodrid”. After setting relevant parameter of docking, a “dpf” files was saved and finally carried out autodock running. 50 conformations were conducted in receptor–ligand interaction generation, and the best affinity was chosen as the final docking conformation and the binding energy ≤ − 5 kCal/mol was regarded as stable.
HepG2 cell culture and administrate
HepG2 cells were bought from National Collection of Authenticated Cell Culteres (China, Beijing) and cultured in MEM containing 10% fetal bovine serum (FBS, TransGen Biotech, China, Shanghai), 100 kU/L penicillin, and 100 mg/L streptomycin (TransGen Biotech, China, Shanghai) at 37 °C in a 5% CO2 humidified incubator. When HepG2 cells were in good condition, ST (5 μM) was added to the cell and incubated for 24 h.
HepG2 cell proliferation detection
HepG2 cells were seeded into 96-well plates at a density of 5000 cells/well. The effect of ST on cell viability was analyzed after treatment for 24 h at different concentration of 0, 1.25, 2.5, 5, and 10 μM. After treatment, 5% CCK8 (Solarbio, China, Beijing)/complete medium was added to the well and incubated for 1 h. Absorbance was measured at 490 nm using a microplate reader (Thermo scientific, United States) and proliferation inhibit ratio was calculated. The maximum safe concentration of the ST will be selected for the mechanism research.
Quantitative real-time PCR analysis
Total RNA was extracted from HepG2 cells using Trizol reagent (Thermo Fisher Scientific, United States). 0.5 μg total RNA was reverse transcribed into cDNA with the Evo M-MLV RT Premix for qPCR (Accurate Biology, China) kit. DNA amplification was conducted by using PerfectStayt Green qPCR SuperMix (TransGen Biotech, China) on a StepOnePlus Real-Time PCR system (Thermo Fisher Scientific, United States). The primers sequences of nuclear genes were shown in Table 1. Relative mRNA levels were calculated by using 2−ΔΔct method and visualized by Graphpad Prism 7.0. (https://www.graphpad.com/scientific-software/prism/www.graphpad.com/scientific-software/prism/).
Western blotting analysis
HepG2 co-cultivated with ST were lysed by RIPA Buffer (Sigma, USA) and centrifuged with the condition of 4 °C, 12,000 rpm and 10 min. The protein content was measured using Pierce BCA Protein Assay Kit (Thermo, USA) and diluted with loading buffer (Beibokit, China) to 5 µg/μL. Protein in an equal amount were separated using SDS–polyacrylamide gel electrophoresis and transferred onto PVDF membranes (Bio-Rad, United States) integrally. PVDF membranes were cut open according to the target’s molecular mass based on the marker and then blocked with 5% skim milk and then washed by TBST (0.5% Tween-50), and incubated with various primary antibody at 4 °C overnight. Primary antibody was recovered and the membranes were incubated with anti-rabbit horseradish peroxidase-conjugated secondary antibody (1:10,000 dilution, Abcam). After washing three times, the membranes were enhanced by chemiluminescence in the ECL reagents (Thermo Fisher Scientific, United States). The membranes were performed with the gel imaging analysis system (Tanon 5220 multi, China) and the image was acquired by Tanon Gis (Tanon 5220 multi, China). Some of the membranes were regenerated and incubated with another primary antibody and anti-rabbit horseradish peroxidase-conjugated secondary antibody and finally performed with the gel imaging analysis system. The gray value was determined with Image J 64-bit (https://imagej.net/ij/download.html)software and visualized by Graphpad Prism 7.0.
Statistical analysis
All experiments were performed independently at least three times and the results were recorded as the mean ± SEM. A one-way ANOVA in SPSS 20.0 software (https://www.ibm.com/support/pages/downloading-ibm-spss-statistics-20) was used to analyze the means between different groups. Differences were considered statistically significant when p < 0.05 in this study.
Results
Ingredient analysis and identification
The total ion chromatography (TIC) of ET in positive and negative ion modes was shown in Fig. 1. A total of 42 chemical constituents (shown in Table 2) were identified in ET by comparing to the reference standard, chromatographic elution behaviors, mass fragment patterns, and mass spectral data in Pubchem (https://pubchem.ncbi.nlm.nih.gov/), Scifinder (https://sso.cas.org/), and CNKI (https://www.cnki.net/).
Quantification of 5 compounds in AT by UPLC
ST, chlorogenic acid, Isochlorogenic acid B, Isochlorogenic acid A and Isochlorogenic acid C were identified by reference standard and the content were determined by UPLC. UPLC (Fig. 2) exerted a good specificity between the mixed calibration solution and the sample solution. The results of the calibration curve (Supplementary Table 1) also exhibited a good linearity with correlation coefficient (R2) more than 0.999 and a wide concentration range. The precision, stability, repeatability and recovery represented as RSD values (Supplementary Table 2) were all less than 5.00%. All of the methodological validation results suggested that this method was accurate, reliable, sensitive, and considered suitable for accurately measuring the main compounds’ content in ET. The content of ST, chlorogenic acid, isochlorogenic acid B, isochlorogenic acid A, and isochlorogenic acid C in ET was measured as 0.426%, 0.457%, 0.159%, 0.701%, and 0.103% respectively.
Screening of the active compounds
A total of 15 compounds showed high pharmacokinetic properties and drug likeness in SwissADME or OB ≥ 30% and DL ≥ 0.18 in TCMSP. These components were selected as the active components of ET. The detailed information of 15 active compounds was listed in Table 3.
Compounds-targets network and PPI-network analysis
Compounds-targets Network and PPI-network Analysis were carried out to enrich the nuclear ingredients and nuclear targets. In this study, a total of 532 targets of the active ingredients were collected from TCMSP, HIT, and Swiss Target Prediction databases. Meanwhile, 19,091 target of liver cancer from GeneCards, DisGenet, and OMIM databases were obtained by searching with the key word “Liver cancer”. Then, 520 overlapping targets (Supplementary Table 3) of compound targets liver cancer related targets were analyzed by screened by Vene analysis (Fig. 3A) and the overlapping targets were regarded as hub targets. Compounds-targets Network was established (Fig. 3B). 7 nuclear compounds, including Quercetin, ST, Luteolin, Isodeoxyelephantopin, 7-Hydroxycoumarine, Elephantopin, and Esculetin were obtained by analyzing the top 10 parameter of Betweenness, Closeness, Information, and Degree (Fig. 3C). Meanwhile, 520 overlapping targets were submitted to STRING to conduct PPI-network (Fig. 3D). AKT1, TP53, TNF, IL6, ALB, SRC, EGFR, IL1B, BCL2, and CASP3 were the top 10 nuclear genes (Fig. 3E) based on the parameter of degree.
GO and KEGG pathway enrichment
GO and KEGG pathway enrichment analysis of the overlapping targets was carried out using Metascape. GO enrichment analysis suggested that a total of 166 molecular function (MF) terms (Supplementary Table 4), 1033 biological process (BP) terms (Supplementary Table 5), and 106 cellular component (CC) terms (Supplementary Table 6) were obtained. The GO functions related to the treatment of liver cancer included execution phase of apoptosis (GO:0097194), regulation of reactive oxygen species biosynthetic process (GO:1903426), oxidoreductase activity (GO:0016491), positive regulation of programmed cell death (GO:0043068), positive regulation of programmed cell death (GO:0043068), negative regulation of cell population proliferation (GO:0008285), response to oxygen levels (GO:0070482), response to decreased oxygen levels (GO:0036293), cellular response to oxygen levels (GO:0071453), cellular response to decreased oxygen levels (GO:0036294), mostly related to promote apoptosis, inhibit proliferation, and regulate oxidative levels. The top 20 entries were respectively selected from MF, BP, and CC, in order of − lg p value (Fig. 4A–C).
KEGG analysis explored 188 signaling pathways (Supplementary Table 7) related to the 520 overlapping targets. The top 50 entries were selected depending on the − lg p value and showed in Fig. 4D. Among them, pathway in cancer (hsa05200) was significantly enriched in top 1, indicating the potential for anti-cancer activity of ET. Meanwhile, promoting apoptosis and inhibiting proliferation related signaling pathways, such as p53 signaling pathway (hsa04115) and MAPK signaling pathway (hsa04010) also collected.
Molecular docking results
According to the result of quantitative analysis, ST is one of the main chemical compounds of ET. Moreover, ST is a nuclear compound in anti-liver cancer network pharmacology analysis of ET, which has been reported to show anti-cancer effect in vitro18,19. Therefore, ST was chosen for further anti-cancer mechanical study. TGFBR1 is a membrane receptor for TGF-β1. Coincidentally, the activity of TGFBR1 is closely related to p38 MAPK/P53 signaling pathway. To further explored the relationship between the nuclear compounds and p38 MAPK/P53 signaling pathway. Molecular docking was used to present the binding affinities of ST and TGFBR1. The result was showed that ST had good binding affinities to TGFBR1, with the binding affinity energy as − 9.3 kcal/mol, suggesting ST may mediate p38 MAPK/P53 signaling pathway by binding to TGFBR1.
ST promote the apoptosis of HepG2
The anti-liver cancer effect on HepG2 was validated in this study. The date revealed that the cell morphology of HepG2 significantly changed after co-culturing with ST at a concentration of 10 μM for 24 h (Fig. 5A–E). CCK8 results also indicated that ST notably inhibited the cell viability of HepG2 in 10 μM when compared with control group (Fig. 5F). Therefore, ST at a concentration of 5 μM and co-culturing for 24 h was chose for further mechanical study in HepG2. Cell morphology changing and cell viability decreasing indicated that ST showed anti-liver cancer effect by inducing cell apoptosis.
ST inhibited the proliferation of HepG2. (A) Cell morphology in control group (0 µM). (B) Cell morphology in 1.25 µM. (C) Cell morphology in 2.50 µM. (D) Cell morphology in 5.00 µM. (E) Cell morphology in 10.00 µM. (F) Cell viability of different doses of ET after treatment for 24. Data are shown as mean ± standard deviation from three independent experiments. *p < 0.05 versus the control.
ST regulated apoptosis related nuclear genes’ expression in mRNA level
Previous study indicated that abnormal expression of CASP320, TNF-α21, IL622, IL1β23, BCL224, and TP5325 in mRNA level closely related to the proliferation or apoptosis of cancer cells. Quantitative Real-Time PCR result reveal that ST downregulated BCL2, IL6, TNF-α, IL1β, and EGFR while upregulated CASP3 and TP53 in mRNA level when compared with control group (Fig. 6).
ST regulated apoptosis related nuclear genes’ expression in mRNA level. (A) The mRNA levels of TP53. (B) The mRNA levels of CASP3. (C) The mRNA levels of BCL2. (D) The mRNA levels of TNF-α. (E) The mRNA levels of IL-1β. (F) The mRNA levels of IL-6. GAPDH was used for normalization. *p < 0.05 versus the control.
ST promote apoptosis of HepG2 via p38 MAPK/p53 signaling pathway
Core proteins of p38 MAPK/p53 signaling pathway in HepG2 were detected by western blotting (Fig. 7). The result indicated that ST notably promoted the protein expression level of p-p38/p38 (p < 0.05) and p-p53/p53 (p < 0.05), indicating ST significantly active p38 MAPK/p53 signaling pathway in HepG2. Meanwhile, BCL-2 and CASP3, core targets of network pharmacology, closely related to cell apoptosis were inhibited and promoted respectively, indicating ST promote apoptosis of HepG2.
ST promote apoptosis of HepG2 via p38 MAPK/p53 signaling pathway. (A) The protein levels of p-p53, p53, p-p38, p38, CASP3, and BCL-2 in HepG2 cells treated with ST for 24 h were determined by Western blot analysis. (B) Quantitative analysis of BCL-2, CASP3, p-p38/p38, and p-p53/p53. GAPDH was used as the loading control. *p < 0.05 versus the control.
Discussion
Liver cancer is the fourth leading cause of cancer death all over the world26 with an estimated incidence of > 1 million cases by 202527. Nowadays, surgical interventions are regarded as the most effective approach for liver cancer. However, extrahepatic metastasis only suitable for limited patients28. Meanwhile, current liver cancer drugs, such as Sorafenib, usually exert limited effects but bring with many side effects and hepatotoxicity29. Therefore, excavating alternative treatment for liver cancer is still urgent needed.
Natural compounds may exert better outcomes in anti-cancer1. Moreover, taking traditional herb medicine with anti-cancer effect natural compounds show fewer side effects and lower systemic toxicity30. ET have long been used as a folk traditional medicine in south of China6. Sesquiterpene lactones from ET show significant anti-cancer activity6. Herein, UPLC-Q-TOF–MS/MS qualitative analysis, UPLC quantitative analysis and network pharmacology analysis by combining ET and liver-cancer were used to predict the anti-liver cancer ingredients in ET. The result indicated that ST, a sesquiterpene lactone compound, is a nuclear compound in anti-liver cancer.
Anti-liver cancer effect of ST was validated on HepG2 and ST significantly inhibited the proliferation of HepG2 in a concentration of 10 µM. Molecule docking, RT-qPCR, and western blotting were applied to explore the anti-liver cancer potential mechanism of ST. Molecule docking result indicated that ST showed a stable binding with TGFBR1, which is a cell membrane receptor and a key upstream protein of p38MAPK signaling pathway. RT-qPCR experiment also confirmed that TP53, the tumor suppressor gene25 and the core downstream gene of p38MAPK signaling pathway, was notably upregulated by ST treatment in HepG2, indicating that ST may bind to TGFBR1 and activate p38MAPK/p53 signaling pathway, which inhibited proliferation and promoted apoptosis31,32.
BCL-2 is an anti-apoptotic gene, which forms heterodimers with BAX. The BAX/BCL-2 ratio plays a role in the balance of apoptosis33. BAX is an important TP53 target34. Activating TP53 may in turn increases BAX protein expression, activates CASP3 protein expression and subsequently induces apoptosis35. In this study, we carried out in vitro experiment to demonstrate that ST promote apoptosis by upregulate TP53, CASP3 and downregulate BCL2 in mRNA and protein expression level, suggesting ST may induce apoptosis of HepG2 by activating TP53/CASP3 signaling pathway.
Hepatocellular carcinoma (HCC) is one of the most common liver cancer worldwide, which accounts for more than 80% of primary liver cancer36. It’s suggested that the inflammatory micro-environment promotes the stemness properties and metastatic potential of HCC37. Modulating the inflammatory microenvironment may provide an efficient therapy for cancer38. IL-1β, IL-6, and TNF-α are the crucial inflammatory cytokines and have been proved to influence the progression liver cancer39,40,41. In this study, nuclear inflammatory genes IL-1β, IL-6, and TNF-α were enriched via network pharmacology analysis. In vitro experiment indicated that the nuclear compound ST inhibited the mRNA expression level of IL-1β, IL-6, TNF-α and the cell proliferation of HepG2, verifying the prediction of network pharmacology analysis and the view that inhibiting inflammatory responses may be an important approach to inhibiting the tumor progression of liver cancer effect or HCC42.
We previous suggested that ST showed a significantly inhibition on A54918, and the anti-cancer effect of ST was also validated on bladder cancer cell43. In this study, we firstly validated the anti-cancer effect of ST on HepG2 and elucidated the potential mechanism. ST, the second main compound of ET, can be regarded as Q-marker of ET, deserving deep study on efficacy and mechanism in vivo and providing anti-liver cancer an alternative treatment.
Conclusion
In summary, we first explored the chemical composition using UPLC-Q-TOF–MS/MS and 42 compounds were identified. Among the compounds being identified, ST, chlorogenic acid, Isochlorogenic acid B, Isochlorogenic acid A and Isochlorogenic acid C were the main compounds. Network pharmacology analysis suggested that ST is the core anti-liver cancer compound and the effect of ST in inhibiting HepG2 proliferation was first validated. Molecule docking date indicated that ST have a stable bind to TGFBR1, which is the upstream protein of p38MAPK signaling pathway. In vitro experiment on HepG2 demonstrated that ST promoted apoptosis by p38MAPK/p53 signaling pathway (Fig. 8). ST can be regarded as Q-marker of ET in the field of anti-cancer. ST can be a potential drug for treating liver cancer and in vivo anti-tumor research should be carried out to validate the effectiveness of inhibiting liver tumor growth.
The permissions statement of collecting Elephantopus tomentosus Linn.
Elephantopus tomentosus Linn. is not a specie at risk of extinction plant, which widely grow in southern China. Elephantopus tomentosus Linn. in this study was planted in Medicinal Botanical Garden of Guangzhou University of Chinese Medicine (Guangzhou, China) and was allowed to collect by Zhan Lu, who is the administrator of the Medicinal Botanical Garden of Guangzhou University of Chinese Medicine. All the collection of Elephantopus tomentosus Linn. comply with relevant institutional, national, and international guidelines and legislation of Convention on the Trade in Endangered Species of Wild Fauna and Flora and IUCN Policy Statement on Research Involving Species at Risk of Extinctio.
Data availability
All data generated or analyzed during this study are included in this published article and are available from the corresponding author on reasonable request.
Abbreviations
- ET:
-
Elephantopus tomentosus Linn.
- BCL-2:
-
B-cell lymphoma-2
- CASP3:
-
Caspase-3
- ESI:
-
Electrospray ionization
- GO:
-
Gene ontology
- IDA:
-
Information-dependent acquisition
- KEGG:
-
Kyto encyclopedia of genes and genomes
- MS:
-
Mass spectrometry
- PPI:
-
Protein-protein interaction
- Q-TOF:
-
Quadrupole-time of flight
- RT-qPCR:
-
Real-time quantitative polymerase chain reaction
- ST:
-
Scabertopin
- TCM:
-
Traditional Chinese medicine
- TIC:
-
Total ion chromatography
- UPLC:
-
Ultra performance liquid chromatography
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Acknowledgements
This study was supported by the Scientific Research Project of Traditional Chinese Medicine Bureau of Guangdong Province, China (Grant No. 20222016 and 20212120); Guangdong Provincial Department of Science and Technology, China (Grant No. 2022A1515220171). The permissions statement of collecting Elephantopus tomentosus Linn. Elephantopus tomentosus Linn. is not a specie at risk of extinction plant, which widely grow in southern China. Elephantopus tomentosus Linn. in this study was planted in Medicinal Botanical Garden of Guangzhou University of Chinese Medicine (Guangzhou, China) and was allowed to collect by Zhan Lu, who is the administrator of the Medicinal Botanical Garden of Guangzhou University of Chinese Medicine. All the collection of Elephantopus tomentosus Linn. comply with relevant institutional, national, and international guidelines and legislation of Convention on the Trade in Endangered Species of Wild Fauna and Flora and IUCN Policy Statement on Research Involving Species at Risk of Extinctio.
Funding
This study was supported by the Scientific Research Project of Traditional Chinese Medicine Bureau of Guangdong Province, China (Grant No. 20222016 and 20212120); Guangdong Provincial Department of Science and Technology, China (Grant No. 2022A1515220171).
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Z.Z. and C.J. carried out most of the in vitro experiments, screened for active compound via Network pharmacology and molecular docking and wrote the original draft, contributed equally to this work. G.X. carried out the experiments of UPLC-Q-TOF-MS/MS. L.L., D.J., R.T., Y.L., J.J., A.X., and Y.L. assisted in compounds analysis or in vitro experiments. D.C., designed and supervised all the studies, and reviewed the manuscript. X.B., funding acquisition, designed and supervised all the studies.
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Zeng, Z., Jia, C., Li, L. et al. Anti-liver tumor ingredient exploration and validation of Elephantopus tomentosus Linn. by combining in silico and in vitro experiments. Sci Rep 14, 21086 (2024). https://doi.org/10.1038/s41598-024-71629-3
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DOI: https://doi.org/10.1038/s41598-024-71629-3
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