Table 2 Primer sequences used in this study to amplify VNTR genes.
VNTR marker | Repeat size (bp) | Size of flanking regions (bp) | Primer sequence (5’–3’) |
---|---|---|---|
Abaum_3530 | 60 | 121 | F-TGCAACCGGTATTCTAGGAAC |
R-CCTTGAACAACATCGATTACTGGA | |||
Abaum_3002 | 57 | 121 | F-GACTGAAGCAAGACTAAAACGT |
R-TCTGGGCAGCTTCTTCTTGAGC | |||
Abaum_2240 | 99 | 494 | F-CCCGCAGTACATCATGGTTC |
R-AGAACATGTATACGCAACTG | |||
Abaum_1988 | 26 | 77 | F-GGCAAGGCATGCTCAAGGGCC |
R-CAGTAGACTGCTGGTTAATGAG | |||
Abaum_0826 | 9 | 208 | F-TGACTACTGAAACAGTTTTTG |
R-ATGATTGTACCGAGTAAAAGA | |||
Abaum_0845 | 7 | 105 | F-AATTTTAATTCCAAATTGCTCC |
R-ACTTAAAATCGCATTTTTATCA | |||
Abaum_2396 | 6 | 105 | F-CAAGTCCAATCAACTCATGATG |
R-CTCCTGTAAGTGCTGTTCAGCC | |||
Abaum_3468 | 6 | 147 | F-CAGAAGTCACTGCATCTGCAAC |
R-CGGTTGAAATTTTTTATAATGAAG |