Table 3 Thermodynamic parameters of VP28 binding to PmRab7-WT in the presence of excess nucleotides.

From: VP28 interacts with PmRab7 irrespective of its nucleotide state

PmRab7 conformation

KD

(nM)

N

VP28:Rab7

ΔH

(kcal/mol)

ΔG

(kcal/mol)

-TΔS

(kcal/mol)

T (ºC)

WT (no excess)

1920 ± 420

0.703 ± 2.0e-2

-20.2 ± 1.35

-7.80

12.4

25

WT + excess GDP

924 ± 234

0.795 ± 2.0e-2

-15.4 ± 0.841

-8.23

7.17

25

WT + excess GTP

826 ± 198

0.738 ± 1.8e-2

-17.0 ± 0.851

-8.30

8.66

25

  1. Note: The dissociation constant (KD), enthalpy change (ΔH), and stoichiometry (N) are directly measured parameters, which are determined from the binding fit isotherm. An error is a fitting error. Gibbs free energy change, ΔG; entropy change (expressed as -TΔS).