Table 1 Comparison of the gene sequences to produce class I lantibiotics and their homicorcin counterparts.
From: Unveiling the biosynthesis mechanism of novel lantibiotic homicorcin: an in silico analysis
Protein | Accession no. | Number of amino acids | Identity | Expect value |
|---|---|---|---|---|
LanA | Identity with HomA | |||
EciA | CAA74348 | 57 | 82% | 7e-34 |
PepA | CAA90023 | 61 | 57% | 1e-19 |
ElxA | AFN69432.1 | 56 | 37% | 6e-07 |
NisA | AWJ76918.1 | 58 | < 20% | - |
LanB | Identity with HomB | |||
EciB | CAA74350 | 976 | 83% | 0.0 |
PepB | CAA90025.1 | 967 | 55% | 0.0 |
ElxB | AFN69434.1 | 986 | 34% | 1e-126 |
NisB | CAA48381.1 | 993 | 25% | 1e-41 |
LanC | Identity with HomC | |||
EciC | CAA74351.1 | 397 | 93% | 0.0 |
PepC | CAA90026.1 | 398 | 58% | 1e-169 |
ElxC | AFN69435.1 | 402 | 35% | 6e-74 |
NisC | CAA48383.1 | 414 | 25% | 2e-25 |
LanT1 | Identity with HomT1 | |||
Epicidin 280 | Not reported | - | - | - |
PepT1 | IPR003439 | 232 | 23% | 1e-09 |
ElxT1 | IPR003439 | 231 | 27.5% | 4e-14 |
NisT1 | IPR003439 | 237 | 25% | 3e-15 |
LanT2 | Identity with HomT2 | |||
Epicidin 280 | Not reported | - | - | - |
PepT2 | IPR011527 | 277 | 53% | 0.047 |
ElxT2 | IPR011527 | 276 | < 20% | - |
NisT2 | IPR011527 | 277 | 29% | 0.041 |
LanP | Identity with HomP | |||
EciP | CAA74349 | 300 | 81% | 0.0 |
PepP | CAA90024.1 | 285 | 56% | 2e-112 |
ElxP | AFN69433.1 | 311 | 41% | 3e-68 |
NisP | AWJ76912.1 | 682 | 23% | 8e-10 |
