Table 2 Genetic diversity indices statistics for the different observed sub-populations.

From: Genetic diversity and population structure of cowpea mutant collection using SSR and ISSR molecular markers

Pop

N

Na

Ne

I

He

%P

Fst value

MAF

GD

PIC

Genetic Diversity based on SSR markers

SP 1

13

1.058

1.100

0.097

0.062

22.33%

0.417

0.95

0.068

0.056

SP 2

9

0.981

1.065

0.065

0.041

16.50%

0.610

0.97

0.048

0.040

SP 3

4

1.019

1.150

0.121

0.083

20.39%

0.372

0.93

0.085

0.067

SP 4

7

1.117

1.103

0.104

0.065

24.27%

0.252

0.94

0.082

0.067

Mean

8.25

1.044

1.105

0.097

0.063

20.87%

0.413

0.95

0.071

0.057

Locus

       

0.92

0.108

 

Genetic Diversity based on SSR markers

SP 1

11

1.418

1.304

0.244

0.168

44.30%

0.235

0.93

0.099

0.082

SP 2

11

1.354

1.316

0.254

0.177

40.51%

0.651

0.90

0.145

0.120

SP 3

11

1.342

1.305

0.241

0.165

44.30%

0.644

0.90

0.134

0.109

Mean

11

1.371

1.308

0.246

0.170

43.04%

0.510

0.91

0.126

0.104

Locus

       

0.82

0.244

 

Combined SSR and ISSR markers

SP 1

8

1.286

1.163

0.155

0.100

34.07%

0.538

0.92

0.107

0.088

SP 2

8

0.0901

1.050

0.047

0.030

10.99%

0.549

0.94

0.080

0.064

SP 3

11

1.110

1.124

0.115

0.075

25.27%

0.409

0.94

0.092

0.076

SP 4

6

1.022

1.093

0.086

0.056

18.68%

0.556

0.94

0.089

0.072

mean

8.25

1.080

1.107

0.010

0.065

22.25%

0.513

0.93

0.09

0.08

  1. N = Population size, Na = No of different alleles, Ne = No of effective alleles, I = Shannon’s Information index, He = Expected Heterozygosity, %P = Percentage of Polymorphic Loci, Fst = Differenciation index, PIC = Polymorphic Information Contain, MAF = Major Allele Frequency and GD = Gene Diversity.
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