Fig. 3 | Scientific Reports

Fig. 3

From: In silico and in vitro analyses reveal the potential use of Streptomyces parvulus VNUA74 as bioagent for sustainable banana production

Fig. 3

Species demarcation of the VNUA74 strain using whole genome data. (a) The dendogram illustrating the taxonomic relationship between the VNUA74 strain (on top) and other Streptomyces type strains, obtained by the TYGS pipeline analysis. The tree was inferred by FastME2 from GDBP distances (d5) calculated from genome sequence34. The branches were numbered based on GBDP pseudo-bootstrap with support value > 60% from 100 replications. Mean branch support was 83.7% based on bootstrap data for all branches. The tree was rooted at the midpoint. (b) The phylogenetic position of the VNUA74 strain and its similar S. parvulus strains based on orthoANI algorithm. Streptomyces ambofaciens ATCC 23,877 was used as an outgroup. (c) The circular map of Streptomyces sp. VNUA74 with annotation done by PATRIC pipeline and viewed on the BV-BRC website.

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