Table 4 The binding free energy (ΔGb) terms of the THD-CYP complexes calculated with the MM-PBSA method (mean ± sd; kcal/mol): Van Der Waals (ΔEvdW), electrostatic (ΔEelect), solvation (ΔEsolv), and solvent accessible surface area (ΔEsasa).
Complex | ΔEvdw | ΔEelect | ΔEsolv | ΔEsasa | ΔGb |
---|---|---|---|---|---|
THD1-CYP51 | − 16.3 ± 1.0 | 2.09 ± 1.8 | 13.8 ± 2.4 | − 1.91 ± 0.1 | − 2.30 ± 1.4 |
THD3-CYP51 | − 14.3 ± 1.3 | − 3.42 ± 1.2 | 7.59 ± 1.0 | − 2.01 ± 0.2 | − 12.1 ± 1.1 |
THD5-CYP51 | − 19.7 ± 1.0 | 1.98 ± 0.8 | 7.68 ± 1.8 | − 2.68 ± 0.1 | − 12.8 ± 1.4 |
THD5-CYP2C9 | − 18.6 ± 1.9 | − 2.55 ± 1.5 | 12.5 ± 1.5 | − 2.71 ± 0.2 | − 11.3 ± 1.7 |