Table 3 The indices of genetic diversity within 4 regions of India based on geographic location.

From: Genetic distances and genome wide population structure analysis of a grain amaranth (Amaranthus hypochondriacus) diversity panel using genotyping by sequencing

Populations

Central India

Himalayan Region

North Eastern Region

Southern and Western Region

Segregation sites

35,137

39,343

31,924

34,940

Ho

0.162

0.158

0.128

0.144

He

0.243

0.184

0.147

0.217

Nucleotide diversity (π)

0.2455

0.1908

0.1677

0.2205

Watterson Estimator (θ)

0.294

0.268

0.258

0.279

TajimaD

−0.048

−0.078

−0.090

−0.059

FIS

0.344

0.169

0.226

0.344

  1. Heo, observed heterozygosity; Hee, expected heterozygosity; π, nucleotide diversity; θ, Watterson estimator; FIS, Inbreeding coefficient.
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