Table 2 The docking results of VPA with the selected targets.
Compound | MTOR (PDB ID- 4JT5) | PTGS2 (PDB ID- 5KIR) | TLR4 (PDB ID- 4G8A) | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|
Binding energy (kcal/mol) | Ligand efficiency | Inhibitory constant | Amino acid Interactions | Binding energy (kcal/mol) | Ligand efficiency | Inhibitory constant | Amino acid interactions | Binding energy (kcal/mol) | Ligand efficiency | Inhibitory constant | Amino acid interactions | |
VPA | − 3.8 | − 0.38 | 1.65 mM | D2357 | − 5.06 | − 0.51 | 195.48 µM | R513, H90, Y355 | − 3.69 | − 0.37 | 1.97 mM | K230, R257 |
Control | − 8.25 | − 0.36 | 895.19 nM | V2240, D2195 | − 10.6 | − 0.48 | 16.98 nM | R513, F518, I517 | – | – | – | – |