Fig. 6

(A) Alpha carbon: Root mean square deviation (RMSD) (B) Root mean square fluctuation (C) Radius of Gyration (D) Solvent- Accessible surface area (SASA) (E) Hydrogen bond (H-bond) (F) Free energy landscape (FEL). The definition of the secondary structure of the protein (DSSP) was used to analyze the 2D structure of the complex. (G) The TLR3 secondary structure (H) The multi-peptide vaccine secondary structure.