Table 3 Core bacterial ASVs (family level) found in at least 80% in all soil samples collected in six Apple orchards located in the Annapolis Valley of Nova scotia.
Family | Mean rel. freq. |
|---|---|
Bacteroidetes; Bacteroidia; Chitinophagales; Chitinophagaceae | 10% |
Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae | 8% |
Acidobacteria; Subgroup_6; Other | 5% |
Proteobacteria; Gammaproteobacteria; Betaproteobacteriales; Nitrosomonadaceae | 5% |
Gemmatimonadetes; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae | 4% |
Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae | 4% |
Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae | 3% |
Actinobacteria; Thermoleophilia; Gaiellales; uncultured | 3% |
Acidobacteria; Acidobacteriia; Acidobacteriales; uncultured | 2% |
Proteobacteria; Gammaproteobacteria; Xanthomonadales; Rhodanobacteraceae | 2% |
Actinobacteria; Thermoleophilia; Gaiellales; Gaiellaceae | 2% |
Acidobacteria; Blastocatellia (Subgroup 4); Pyrinomonadales; Pyrinomonadaceae | 2% |
Verrucomicrobia; Verrucomicrobiae; Chthoniobacterales; Chthoniobacteraceae | 2% |
Acidobacteria; Acidobacteriia; Solibacterales; Solibacteraceae (Subgroup 3) | 1% |
Planctomycetes; _Phycisphaerae; _Tepidisphaerales; _WD2101_soil_group | 1% |
Actinobacteria; MB-A2-108; Other; Other | 1% |
Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae | 1% |
Proteobacteria; Gammaproteobacteria; Gammaproteobacteria Incertae Sedis | 1% |
Actinobacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae | 1% |
Actinobacteria; Thermoleophilia; Solirubrobacterales; 67 − 14 | 1% |
Acidobacteria; Blastocatellia (Subgroup 4); Blastocatellales; Blastocatellaceae | 1% |
Bacteroidetes; Bacteroidia; Cytophagales; Microscillaceae | 1% |
Actinobacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae | 1% |
Actinobacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae | 1% |
Proteobacteria; Deltaproteobacteria; Myxococcales; Haliangiaceae | 1% |
Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae | 1% |
Proteobacteria; Deltaproteobacteria; Desulfarculales; Desulfarculaceae | 1% |
Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiales Incertae Sedis | 1% |
Verrucomicrobia; Verrucomicrobiae; Pedosphaerales; Pedosphaeraceae | 1% |
Actinobacteria; Actinobacteria; Micromonosporales; Micromonosporaceae | 1% |
Acidobacteria; Holophagae; Subgroup 7;Other | 1% |
Other; Other; Other; Other | 1% |
Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae | 1% |
Actinobacteria; Thermoleophilia; Gaiellales; Other | 1% |
Proteobacteria; Gammaproteobacteria; Betaproteobacteriales; TRA3-20 | 1% |
Actinobacteria; Thermoleophilia; Solirubrobacterales; Solirubrobacteraceae | 1% |
Actinobacteria; Acidimicrobiia; IMCC26256; Other | 1% |
Proteobacteria; Alphaproteobacteria; uncultured; Other | < 1% |
Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae | < 1% |
Bacteroidetes; _Bacteroidia; _Chitinophagales; _uncultured | < 1% |
Nitrospirae; Nitrospira; Nitrospirales; Nitrospiraceae | < 1% |
Actinobacteria; _Actinobacteria; Frankiales; Nakamurellaceae | < 1% |
Rokubacteria; NC10; Rokubacteriales; Other | < 1% |
Proteobacteria; Alphaproteobacteria; Elsterales; URHD0088 | < 1% |
