Table 3 Drug likeness analysis of designed Benzimidazole derivatives (P1–P50).
From: Molecular docking and pharmacokinetics of benzimidazole-based FtsZ inhibitors for tuberculosis
Comp. Code | Physicochemical properties | Lipinski’s Rule | %Abs | N viol | N rot | |||||
---|---|---|---|---|---|---|---|---|---|---|
R | MW | TPSA | milogP | HA | HD | |||||
P1 | CH2CH3 | 311.34 | 87.38 | 3.70 | 4 | 3 | Yes | 78.85 | 0 | 5 |
P2 | CH2CH2CH2CH3 | 339.39 | 87.38 | 4.60 | 4 | 3 | Yes | 78.85 | 0 | 7 |
P3 | CH2CH2CH3 | 325.37 | 87.38 | 4.06 | 4 | 3 | Yes | 78.85 | 0 | 6 |
P4 | CH2COOH | 341.32 | 124.68 | 2.37 | 6 | 4 | Yes | 65.99 | 0 | 6 |
P5 | 2–OHC6H4 | 375.38 | 107.61 | 4.18 | 5 | 4 | Yes | 71.87 | 0 | 5 |
P6 | CH2CH2COOH | 355.35 | 124.68 | 2.67 | 6 | 4 | Yes | 65.99 | 0 | 7 |
P7 | 3–OHC6H4 | 375.38 | 107.61 | 4.18 | 5 | 4 | Yes | 71.87 | 0 | 5 |
P8 | 4–OHC6H4 | 375.38 | 107.61 | 4.18 | 5 | 4 | Yes | 71.87 | 0 | 5 |
P9 | 2,3–OHC6H3 | 391.38 | 127.84 | 3.82 | 6 | 5 | Yes | 64.90 | 0 | 5 |
P10 | 2,4–OHC6H3 | 391.38 | 127.84 | 3.82 | 6 | 5 | Yes | 64.90 | 0 | 5 |
P11 | 2,5–OHC6H3 | 391.38 | 127.84 | 3.82 | 6 | 5 | Yes | 64.90 | 0 | 5 |
P12 | 2,6–OHC6H3 | 391.38 | 127.84 | 3.82 | 6 | 5 | Yes | 64.90 | 0 | 5 |
P13 | 3,4–OHC6H3 | 391.38 | 127.84 | 3.82 | 6 | 5 | Yes | 64.90 | 0 | 5 |
P14 | 3,5–OHC6H3 | 391.38 | 127.84 | 3.82 | 6 | 5 | Yes | 64.90 | 0 | 5 |
P15 | 3–ClC6H4 | 393.83 | 87.38 | 5.16 | 4 | 3 | Yes | 78.85 | 0 | 5 |
P16 | 2–CH3C6H4 | 373.41 | 87.38 | 4.90 | 4 | 3 | Yes | 78.85 | 0 | 5 |
P17 | 2–COOHC6H4 | 403.39 | 124.68 | 4.06 | 6 | 4 | Yes | 65.99 | 0 | 6 |
P18 | 2–NH2C6H4 | 374.40 | 113.40 | 3.85 | 4 | 5 | Yes | 69.88 | 0 | 5 |
P19 | 3–NO2C6H4 | 404.38 | 133.20 | 4.36 | 6 | 3 | Yes | 63.05 | 0 | 6 |
P20 | 2–COOHC6H4 | 403.39 | 124.68 | 4.06 | 6 | 4 | Yes | 65.99 | 0 | 6 |
P21 | 3–BrC6H4 | 438.28 | 87.38 | 5.23 | 4 | 3 | Yes | 78.85 | 0 | 5 |
P22 | 4–BrC6H4 | 438.28 | 87.38 | 5.23 | 4 | 3 | Yes | 78.85 | 0 | 5 |
P23 | 4–CH2BrC6H4 | 452.31 | 87.38 | 5.09 | 4 | 3 | Yes | 78.85 | 0 | 6 |
P24 | 4–NO2C6H4 | 404.38 | 133.20 | 4.36 | 6 | 3 | Yes | 63.05 | 0 | 6 |
P25 | 3,4,5–OHC6H2 | 407.38 | 148.06 | 3.47 | 7 | 6 | Yes | 57.92 | 1 | 5 |
P26 | CH=CH–C6H5 | 385.42 | 87.38 | 5.18 | 4 | 3 | Yes | 78.85 | 0 | 6 |
P27 | 6–NO2C6H4 | 404.38 | 133.20 | 4.36 | 6 | 3 | Yes | 63.05 | 0 | 6 |
P28 | 4–CH3C6H4 | 373.41 | 87.38 | 4.90 | 4 | 3 | Yes | 78.85 | 0 | 5 |
P29 | 2–NH2–3–OH–C6H3 | 390.40 | 133.63 | 3.50 | 5 | 5 | Yes | 62.90 | 0 | 5 |
P30 | CH=CH–3,4,5–OHC6H3 | 433.42 | 148.06 | 4.11 | 7 | 6 | Yes | 57.92 | 1 | 6 |
P31 | CH=CH–4–OHC6H4 | 401.42 | 107.61 | 4.82 | 5 | 4 | Yes | 71.87 | 0 | 6 |
P32 | 2–OCOCH3C6H4 | 405.41 | 105.85 | 4.29 | 6 | 3 | Yes | 72.48 | 0 | 7 |
P33 | 2-OH–3–CH3C6H3 | 389.41 | 107.61 | 4.54 | 5 | 4 | Yes | 71.87 | 0 | 5 |
P34 | 2–OH–5–SO3HC6H3 | 455.45 | 161.98 | 2.93 | 8 | 5 | Yes | 53.12 | 0 | 6 |
P35 | 3–CH3–4–NO2C6H3 | 418.41 | 133.20 | 4.73 | 6 | 3 | Yes | 63.05 | 0 | 6 |
P36 | 4–CH3–6–NO2C6H3 | 418.41 | 133.20 | 4.73 | 6 | 3 | Yes | 63.05 | 0 | 6 |
P37 | CH3CHOH | 327.34 | 107.61 | 2.42 | 5 | 4 | Yes | 71.87 | 0 | 5 |
P38 | 2,5–OHC6H3 | 391.38 | 127.84 | 3.82 | 6 | 5 | Yes | 64.90 | 0 | 5 |
P39 | 3–OCH3–4–OHC6H3 | 405.41 | 116.84 | 4.15 | 6 | 4 | Yes | 68.69 | 0 | 6 |
P40 | 4–OCH3C6H4 | 389.41 | 96.61 | 4.51 | 5 | 3 | Yes | 75.67 | 0 | 6 |
P41 | COCH3 | 401.42 | 104.45 | 2.89 | 5 | 3 | Yes | 72.96 | 0 | 6 |
P42 | CH2–CHOH–COOH | 371.35 | 144.91 | 2.11 | 7 | 5 | Yes | 59.01 | 0 | 7 |
P43 | Pyridine | 360.37 | 100.27 | 3.46 | 5 | 3 | Yes | 74.41 | 0 | 5 |
P44 | CH=CH–COOH | 353.33 | 124.68 | 2.86 | 6 | 4 | Yes | 65.99 | 0 | 6 |
P45 | CH=CH2 | 309.32 | 87.38 | 3.68 | 4 | 3 | Yes | 78.85 | 0 | 5 |
P46 | (CH2OH)5 | 433.42 | 188.52 | − 0.48 | 9 | 8 | No | 43.96 | 2 | 9 |
P47 | COOH | 327.30 | 124.68 | 2.73 | 6 | 4 | Yes | 65.99 | 0 | 5 |
P48 | (CH2)3COOH | 369.38 | 124.68 | 3.02 | 6 | 4 | Yes | 65.99 | 0 | 8 |
P49 | (CH2OH)2COOH | 387.35 | 165.13 | 1.00 | 8 | 6 | Yes | 52.03 | 1 | 7 |
P50 | CH2NHCOC6H5 | 416.44 | 116.48 | 3.68 | 5 | 4 | Yes | 68.81 | 0 | 7 |
PAS | – | 153.14 | 83.55 | 1.32 | 3 | 3 | Yes | 80.17 | 0 | 1 |
Isoniazid | – | 137.14 | 68.01 | − 0.70 | 3 | 2 | Yes | 85.54 | 0 | 2 |
Ethambutol | – | 204.31 | 64.52 | − 0.08 | 4 | 4 | Yes | 86.74 | 0 | 9 |