Table 3 Drug likeness analysis of designed Benzimidazole derivatives (P1–P50).

From: Molecular docking and pharmacokinetics of benzimidazole-based FtsZ inhibitors for tuberculosis

Comp. Code

Physicochemical properties

Lipinski’s Rule

%Abs

N viol

N rot

R

MW

TPSA

milogP

HA

HD

P1

CH2CH3

311.34

87.38

3.70

4

3

Yes

78.85

0

5

P2

CH2CH2CH2CH3

339.39

87.38

4.60

4

3

Yes

78.85

0

7

P3

CH2CH2CH3

325.37

87.38

4.06

4

3

Yes

78.85

0

6

P4

CH2COOH

341.32

124.68

2.37

6

4

Yes

65.99

0

6

P5

2–OHC6H4

375.38

107.61

4.18

5

4

Yes

71.87

0

5

P6

CH2CH2COOH

355.35

124.68

2.67

6

4

Yes

65.99

0

7

P7

3–OHC6H4

375.38

107.61

4.18

5

4

Yes

71.87

0

5

P8

4–OHC6H4

375.38

107.61

4.18

5

4

Yes

71.87

0

5

P9

2,3–OHC6H3

391.38

127.84

3.82

6

5

Yes

64.90

0

5

P10

2,4–OHC6H3

391.38

127.84

3.82

6

5

Yes

64.90

0

5

P11

2,5–OHC6H3

391.38

127.84

3.82

6

5

Yes

64.90

0

5

P12

2,6–OHC6H3

391.38

127.84

3.82

6

5

Yes

64.90

0

5

P13

3,4–OHC6H3

391.38

127.84

3.82

6

5

Yes

64.90

0

5

P14

3,5–OHC6H3

391.38

127.84

3.82

6

5

Yes

64.90

0

5

P15

3–ClC6H4

393.83

87.38

5.16

4

3

Yes

78.85

0

5

P16

2–CH3C6H4

373.41

87.38

4.90

4

3

Yes

78.85

0

5

P17

2–COOHC6H4

403.39

124.68

4.06

6

4

Yes

65.99

0

6

P18

2–NH2C6H4

374.40

113.40

3.85

4

5

Yes

69.88

0

5

P19

3–NO2C6H4

404.38

133.20

4.36

6

3

Yes

63.05

0

6

P20

2–COOHC6H4

403.39

124.68

4.06

6

4

Yes

65.99

0

6

P21

3–BrC6H4

438.28

87.38

5.23

4

3

Yes

78.85

0

5

P22

4–BrC6H4

438.28

87.38

5.23

4

3

Yes

78.85

0

5

P23

4–CH2BrC6H4

452.31

87.38

5.09

4

3

Yes

78.85

0

6

P24

4–NO2C6H4

404.38

133.20

4.36

6

3

Yes

63.05

0

6

P25

3,4,5–OHC6H2

407.38

148.06

3.47

7

6

Yes

57.92

1

5

P26

CH=CH–C6H5

385.42

87.38

5.18

4

3

Yes

78.85

0

6

P27

6–NO2C6H4

404.38

133.20

4.36

6

3

Yes

63.05

0

6

P28

4–CH3C6H4

373.41

87.38

4.90

4

3

Yes

78.85

0

5

P29

2–NH2–3–OH–C6H3

390.40

133.63

3.50

5

5

Yes

62.90

0

5

P30

CH=CH–3,4,5–OHC6H3

433.42

148.06

4.11

7

6

Yes

57.92

1

6

P31

CH=CH–4–OHC6H4

401.42

107.61

4.82

5

4

Yes

71.87

0

6

P32

2–OCOCH3C6H4

405.41

105.85

4.29

6

3

Yes

72.48

0

7

P33

2-OH–3–CH3C6H3

389.41

107.61

4.54

5

4

Yes

71.87

0

5

P34

2–OH–5–SO3HC6H3

455.45

161.98

2.93

8

5

Yes

53.12

0

6

P35

3–CH3–4–NO2C6H3

418.41

133.20

4.73

6

3

Yes

63.05

0

6

P36

4–CH3–6–NO2C6H3

418.41

133.20

4.73

6

3

Yes

63.05

0

6

P37

CH3CHOH

327.34

107.61

2.42

5

4

Yes

71.87

0

5

P38

2,5–OHC6H3

391.38

127.84

3.82

6

5

Yes

64.90

0

5

P39

3–OCH3–4–OHC6H3

405.41

116.84

4.15

6

4

Yes

68.69

0

6

P40

4–OCH3C6H4

389.41

96.61

4.51

5

3

Yes

75.67

0

6

P41

COCH3

401.42

104.45

2.89

5

3

Yes

72.96

0

6

P42

CH2–CHOH–COOH

371.35

144.91

2.11

7

5

Yes

59.01

0

7

P43

Pyridine

360.37

100.27

3.46

5

3

Yes

74.41

0

5

P44

CH=CH–COOH

353.33

124.68

2.86

6

4

Yes

65.99

0

6

P45

CH=CH2

309.32

87.38

3.68

4

3

Yes

78.85

0

5

P46

(CH2OH)5

433.42

188.52

− 0.48

9

8

No

43.96

2

9

P47

COOH

327.30

124.68

2.73

6

4

Yes

65.99

0

5

P48

(CH2)3COOH

369.38

124.68

3.02

6

4

Yes

65.99

0

8

P49

(CH2OH)2COOH

387.35

165.13

1.00

8

6

Yes

52.03

1

7

P50

CH2NHCOC6H5

416.44

116.48

3.68

5

4

Yes

68.81

0

7

PAS

153.14

83.55

1.32

3

3

Yes

80.17

0

1

Isoniazid

137.14

68.01

− 0.70

3

2

Yes

85.54

0

2

Ethambutol

204.31

64.52

− 0.08

4

4

Yes

86.74

0

9

  1. aMW Molecular weight (g/mol), bTPSA Total Polar Surface Area (A0), cmiLogP Molinspiration Partition coefficient, d%Abs: %Abs = 109 − (0.345 × TPSA), enviol: number of violations, fnrotb: number of rotatable bonds, HA: number of Hydrogen bond acceptors, HD: number of hydrogen bond donors.