Table 2 Basic genomic and biological characteristics of the phage infecting V. parahaemolyticus.
From: Characterization and genome analysis of a novel phage BP15 infecting Vibrio parahaemolyticus
Phage name | Genome Size (bp) | G + C (%) | Head size (nm) | Tail size (nm) | Latent period (min) | Burst size (PFUs cell− 1) | Annotated ORFs | tRNAs | ARGs | Viru-lence genes | Inte-grase | Source | Refer-ence | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
vB_VpaS_BP15 | 59,584 | 46.7 | 69.11 ± 5.38 / 65.40 ± 6.89 | 139.81 ± 14.79 | 30 | 120 | 66 | 0 | 0 | 0 | 0 | Oyster | This study | |
vB_VpaS_ALK | 57,805 | 45.9 | - | - | 10 | 168 | 94 | 0 | 0 | 0 | 0 | Chocolate clam | ||
vB_VpaS_CHI | 57,805 | 45.9 | - | - | 20 | 111 | 95 | 0 | 0 | 0 | 0 | Chinese snail | ||
vB_VpaS_AL-2 | 58,457 | - | - | - | 40 | 68 | 92 | 1 | 0 | 0 | 0 | Estuary water | ||
vB_VpaS_BA3 | 58,648 | - | - | - | - | - | - | - | - | - | - | Sewage water | UN | |
vB_VpaS_CA8 | 58,480 | - | - | - | - | - | - | - | - | - | - | Sewage water | UN | |
vB_VpaP_DE10 | 42,871 | 49.19 | 52.4 ± 2.5 | 21.9 ± 1.0 | 25 | 19 | 46 | 0 | 0 | 0 | 0 | Sewage water | ||
vB_VpaP_DE17 | 43,397 | 49.23 | 47 ± 2 | 17 ± 2 | - | - | 49 | 0 | 0 | 0 | 0 | Sewer | ||
vB_VpaP_FE11 | 43,397 | 49.24 | 47 ± 2 | 18 ± 2 | 15 | 37 | 50 | 0 | - | - | 0 | Sewer | ||
vB_VpaS_AL-1 | 42,854 | - | - | - | 30 | 85 | 53 | 0 | 0 | 0 | 0 | Estuary water | ||
vB_VpaS_PG28 | 82,712 | 48.08 | 56 ± 3 | 112 ± 6 | 60 | 103 | 114 | 0 | 0 | 0 | 0 | - | ||
vB_VpaS_PP24 | 83,482 | - | - | - | - | - | - | - | - | - | - | Penaeus vannamei | UN | |
29Fa.3 | 79,348 | - | - | - | - | - | - | - | - | - | - | Coastal water | UN | |
PH669 | 18,896 | - | - | - | - | - | - | - | - | - | - | - | UN | |
vB_VpaS_VP-RY-9 | 81,604 | - | - | - | - | - | - | - | - | - | - | Sewage water | UN | |
vB_VpaS_PG07 | 112, 106 | 43.65 | 80 | 175 | 10 | 60 | 158 | 6 | 0 | 0 | 0 | Shrimp pond water | ||
VP-1 | 150,764 | 41.84 | 87.59 ± 1.34 | 94.43 ± 1.71 | 10 | 44 | 203 | 1 | 0 | 0 | 0 | Shrimp pond water | ||
Vpkk5 | 56,637 | 53.1 | 70.9 ± 3.2/ 59.9 ± 3.4 | 117.4 ± 5.6 | 36 | 180 | 80 | 1 | - | 0 | 0 | Coastal sand sediment | ||
pVp-1 | 111,506 | 39.71 | 63 ± 6 | 129 ± 7 | 15 | 47 | 157 | 19 | 0 | 0 | 0 | Seawater | ||
SHOU24 | 77,837 | 46 | 60 | 203 | 10 | 127 | 88 | 0 | 0 | 0 | 0 | Sewage water | ||
VPMS1 | 42,313 | 44.67 | 60 | 10 | - | - | 53 | 0 | - | - | - | Marine clam | ||
vB_VpaS_Mar10 | 78,751 | 49.7 | ~ 50 × 94 | 160 | - | - | 104 | - | - | - | 0 | Seawater | ||
phi-pp2 | 246,421 | 42.6 | ~ 90 × 150 | 120 | - | - | 383 | 30 | - | - | - | Aquaculture waterways | ||
