Table 1 Frequencies of nonsynonymous mutations of pvdbpII and pvmsp142 in Yala and Tak.
From: Molecular epidemiology and genetic diversity of disappearing Plasmodium vivax in southern Thailand
Gene | Chromosome | Chromosomal position | Mutation | REF | ALT | Frequency (%) | |
---|---|---|---|---|---|---|---|
Yala | Tak | ||||||
pvdbpII | Chr6 | 983,147 | N330D | A | G | 1.4 | 24.3 |
Chr6 | 983,177 | E340K | G | A | 31.4 | 40.0 | |
Chr6 | 983,182 | K341N | G | T | 28.6 | 41.4 | |
Chr6 | 983,216 | S353T | T | A | 37.1 | 5.7 | |
Chr6 | 983,235 | T359R | C | G | 28.6 | 5.7 | |
Chr6 | 983,238 | A360E | C | A | 1.4 | 0 | |
Chr6 | 983,275 | N372K | T | A | 1.4 | 42.9 | |
Chr6 | 983,333 | W392R | T | C | 1.4 | 60.0 | |
Chr6 | 983,363 | K402S | A | T | 35.7 | 97.1 | |
Chr6 | 983,364 | K402T | A | C | 8.6 | 0 | |
pvmsp142 | Chr7 | 1,219,777 | K1449M | A | T | 100.0 | 78.6 |
Chr7 | 1,219,782 | L1451V | C | G | 95.7 | 22.9 | |
Chr7 | 1,219,861 | A1477E | C | A | 1.4 | 11.4 | |
Chr7 | 1,219,863 | Q1478E | C | G | 1.4 | 64.3 | |
Chr7 | 1,219,882 | D1484A | A | C | 97.1 | 14.3 | |
Chr7 | 1,219,892 | N1487K | C | A | 91.4 | 28.6 | |
Chr7 | 1,219,893 | T1488A | A | G | 84.3 | 4.3 | |
Chr7 | 1,219,896 | Q1489E | C | G | 91.4 | 4.3 | |
Chr7 | 1,219,899 | N1490D | A | G | 90.0 | 10.0 | |
Chr7 | 1,219,904 | E1491D | G | T | 92.9 | 4.3 | |
Chr7 | 1,219,905 | E1492K | G | A | 90.0 | 5.7 | |
Chr7 | 1,219,908 | L1493I | C | A | 92.9 | 5.7 | |
Chr7 | 1,219,915 | K1495T | A | C | 84.3 | 0 | |
Chr7 | 1,219,921 | E1497G | A | G | 84.3 | 1.4 | |
Chr7 | 1,219,924 | N1498S | A | G | 82.9 | 1.4 | |
Chr7 | 1,219,928 | E1499D | A | T | 85.7 | 7.1 | |
Chr7 | 1,219,929 | A1500S | G | A | 87.1 | 7.1 | |
Chr7 | 1,219,929 | A1500T | G | A | 7.1 | 11.4 | |
Chr7 | 1,219,930 | N1501T | C | G | 82.9 | 7.1 | |
Chr7 | 1,219,938 | T1503A | A | G | 1.4 | 5.7 | |
Chr7 | 1,219,941 | A1504T | G | A | 91.4 | 8.6 | |
Chr7 | 1,219,950 | A1507T | G | A | 88.6 | 7.1 | |
Chr7 | 1,219,953 | K1508Q | A | C | 88.6 | 7.1 | |
Chr7 | 1,219,957 | F1509S | T | C | 87.1 | 7.1 | |
Chr7 | 1,219,958 | F1509L | T | G | 2.9 | 0 | |
Chr7 | 1,219,960 | T1510I | C | T | 14.3 | 7.1 | |
Chr7 | 1,219,960 | T1510M | C | T | 84.3 | 7.1 |