Table 1 Structure variants detected by Nanopore sequencing.

From: Identification of a cryptic unbalanced translocation Der(22)t(12;22)(q24.33;q13.33) in a large Chinese family with Phelan-McDermid syndrome by nanopore sequencing

NO.

Chromosome location

break location

Variation interval

size

type

Population frequency

Dose sensitive genes

Pathogenicity

1

12q24.33

Chr12:130583071

Chr12: 130,583,071–133,851,895

3.26 Mb

DUP

0

none

VUS

2

22q13.33

Chr22:49736725

chr22:49736725–51,304,566

1.5 Mb

DEL

0

SHANK3

Pathogenic

  1. DUP: duplication; DEL: deletion; VUS: variants of uncertain significance.