Table 2 Minor allele frequency (MAF) of the variants of uncertain significance with high pathogenicity scores.

From: Pathogenic variants in the Alport genes are prevalent in the Singapore multiethnic population with highest frequency in the Chinese

Gene

Variant

MAF in Chinese

MAF in Indian

MAF in Malay

MAF in SG10K

MAF in gnomAD

References

COL4A3

c.1367_1369delATC

(p.Tyr456delTyr)

2.79E-04

0

0

1.68E-04

1.92E-05

23,55

COL4A3

c.1994G > C (p.Gly665Ala)

0

2.68E-04

0

5.60E-05

4.34E-06

-

COL4A3

c.3321_3329delAAGTCCTGG (p.Ser1108_Gly1110delSerProGly)

9.30E-05

0

0

5.60E-05

2.73E-05

56,57

COL4A3

c.3691G > A (p.Gly1231Ser)

1.87E-04

0

0

1.13E-04

1.14E-05

58,59,60

COL4A3

c.3956G > A (p.Gly1319Glu)

9.40E-05

0

0

5.60E-05

1.41E-05

-

COL4A4

c.3424G > A (p.Gly1142Arg)

9.40E-05

0

0

5.60E-05

 

-