Table 3 Differentially expressed transcripts identified in Longissimus thoracis muscle of Nellore cattle divergent for ribeye area (REA).

From: Multi-omics integration identifies molecular markers and biological pathways for carcass and meat quality traits in Nellore cattle

ID

Transcript

log2FC

SE

p-value

q-value

rna-XM_003586240.5_1

YJEFN3

-1.0247

0.3110

3.14E-05

0.0083

rna-XM_024997942.1_1

MYH6

-0.8988

0.3148

1.21E-04

0.0281

rna-NM_001046565.1_1

CCNB1IP1

-0.8747

0.2152

1.78E-06

0.0006

rna-NM_001163188.1_1

TRMU

0.5320

0.1609

3.18E-05

0.0083

rna-XM_005201589.4_1

TTC14

1.0456

0.3143

2.51E-05

0.0068

rna-XM_005223766.4_1

CDKAL1

2.3407

4.4291

2.99E-05

0.0079

rna-XM_015460792.2_1

EBF3

2.4342

1.9496

1.50E-04

0.0341

rna-XM_005227570.3_1

FMR1

3.1799

1.0423

6.34E-05

0.0158

rna-XM_015459875.2_1

BAG6

4.2399

1.8175

1.34E-04

0.0309

rna-XM_024976746.1_1

RERE

4.3852

1.8197

5.77E-06

0.0018

  1. ID: transcript identification; Transcript: gene symbol; log2FC: log2 fold change (relative expression); SE: standard error. The positive sign of the fold change estimates refers to the high REA group.
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