Table 6 Genes, transcript and proteins with pleiotropic effects on the traits studied.

From: Multi-omics integration identifies molecular markers and biological pathways for carcass and meat quality traits in Nellore cattle

Trait*

ID

Trait*

ID

REA (gene) MT (gene)

LOC107132664

REA (protein) MAR (transcript)

ACTR1B

MT (gene) Marb (protein)

CAST

REA (protein) MAR (protein)

CLIP1, DOCK7

MT (protein) MT (transcript)

NEXN, ZNHIT6

REA (protein) BFT (protein)

LOC101906513

BFT (protein) MT (protein)

SCAPER, FGG

REA (protein) MT (transcript)

HSP90AB1

MT (protein) Marb (protein)

MGA, TAGLN

BFT (transcript) MAR (transcript)

MAST2, FAM207A, MYOM2, NFIX, UXS1, PRSS23, MOG

REA (protein) BFT (gene)

HPS4, PRDX5

REA (protein) MT (protein)

CPLANE1, SIRT5, SERPINA4

BFT (protein) Marb (protein)

GPR179, CAND1, UBA6, COX10

BFT (protein) BFT (transcript)

HNRNPM, CAMK2B, INTS3

  1. *Refers to the phenotypic traits. REA – ribeye area; MT – meat tenderness; MAR – marbling; BFT – backfat thickness.
  2. Gene, transcript and protein correspond to the molecule obtained by GWAS, RNA-Seq and LC–MS/MS, respectively. ID: identification of gene, transcript or protein with pleiotropic effect.
Back to article page