Table 1 Performance of Eight Baseline Models on \(F_{max}\), \(S_{min}\) and AUPR Scores.
Method | AUPR | \(F_{max}\) | \(S_{min}\) | ||||||
---|---|---|---|---|---|---|---|---|---|
MF | BP | CC | MF | BP | CC | MF | BP | CC | |
TAWFN21 | 0.718 | 0.385 | 0.488 | 0.762 | 0.628 | 0.693 | 0.326 | 0.483 | 0.454 |
DeepGO22 | 0.391 | 0.189 | 0.258 | 0.576 | 0.500 | 0.589 | 0.475 | 0.578 | 0.553 |
DeepFRI23 | 0.495 | 0.265 | 0.274 | 0.627 | 0.546 | 0.617 | 0.432 | 0.543 | 0.530 |
HEAL24 | 0.661 | 0.339 | 0.435 | 0.733 | 0.613 | 0.673 | 0.357 | 0.499 | 0.475 |
BLAST8 | 0.136 | 0.067 | 0.096 | 0.326 | 0.336 | 0.443 | 0.643 | 0.662 | 0.632 |
ATGO25 | 0.708 | 0.249 | 0.306 | 0.76 | 0.318 | 0.703 | 0.336 | 0.600 | 0.539 |
DeepGOPlus26 | 0.422 | 0.199 | 0.266 | 0.595 | 0.555 | 0.611 | 0.453 | 0.566 | 0.621 |
GAT-GO27 | 0.660 | 0.381 | 0.479 | 0.633 | 0.492 | 0.547 | 0.437 | 0.521 | 0.466 |
MultiPreGO28 | 0.363 | 0.326 | 0.568 | 0.367 | 0.328 | 0.536 | Nan | Nan | Nan |
MMPFP | 0.721 | 0.401 | 0.495 | 0.769 | 0.632 | 0.695 | 0.320 | 0.480 | 0.448 |