Table 3 Summary of patients with atypical melanocytic tumors and adverse clinical outcomes.

From: Improving diagnostic accuracy in atypical melanocytic tumors using p16 immunohistochemistry and 9p21 fluorescence in situ hybridization: analysis of 206 second opinion cases

Patient no

Sex

Age, y

Site

Breslow index (mm)

Histological type

Cytology

IHC

Molecular findings

Molecular technique usefulness and impact (i score)

Histological category

Follow-up, year

Clinical reexcision, largest diameter

Sentinel node

Clinical outcome

1

F

62

Thorax

2.2

SRT

Dense nests of spindle cells

p16+

No 9p21 deletion, no 4-color melanoma FISH abnormality

Not helpful: histologically certain melanoma diagnosis (i = 0)

Spitzoid melanoma (A+)

12

Yes, 20 mm

Yes, positive

pT3aN1aM0, in remission to date

2

M

44

Knee

5.3

SRT

Nests of epithelioid cells and spindle cells, desmoplastic stroma

p16

Heterozygous 9p21 deletion, no BRAF mutation, NRAS p.Q61X mutation

Not helpful: histologically certain melanoma diagnosis (i = 0)

Spitzoid melanoma (A+)

9

Yes

Yes, negative

LN metastases and in-transit melanoma metastasis on the same leg, 8 years after initial diagnosis

3

M

49

Loins

1.6

SRT

Moderate cellular proliferation of spindle cells

p16 clonal

Heterozygous 9p21 deletion

Heterozygosity did not aid in the diagnosis (i = 0)

Unclear: Spitzoid melanoma or atypical Spitz tumor (DA+)

8

No

No

Tumor-attributed death

4

F

36

Cheek

NC

SRT

Bundles of spindle cells

p16+, BRAFV600E–

Heterozygous 9p21 deletion

Heterozygosity did not aid in the diagnosis (i = 0)

Atypical Spitz nevus (DA)

7

No

No

Died, but superficial spreading melanoma on the temple (BRAFV600E+) 4 y earlier, considered cause of death

5

F

38

Foot

1.8

SRT

Nests of spindle cells

p16

Homozygous 9p21 deletion, 4-color melanoma FISH with MYB deletion, NRAS p.Q61K mutation

Switch from DA to DA+ category (i = 2)

Unclear: Spitzoid melanoma or atypical Spitz tumor (DA+)

6

Unknown

No

Pulmonary & subcutaneous metastases, treated with immunotherapy

6

H

24

Trunk

2.1

SRT

Clonal proliferation of spitzoid cells

p16 clonal

Heterozygous 9p21 deletion, 4-color melanoma FISH harbors RREB1 gain, MYB deletion, RREB1/CYP6

9p21 did not help, 4-color melanoma FISH confirmed the malignancy (i = 0)

Spitzoid melanoma (A+)

6

Yes, 20 mm

No

Regional LN recurrence 1-year post-diagnosis, died while on immunotherapy

7

H

4

Leg

3.3

SRT

Nests of epithelioid cells in a desmoplastic stroma, with some zones of spindle cells

p16, ALK+

spindle cells

Homozygous 9p21 deletion

9p21 was helpful, but the ALK+ profile prevented malignancy affirmation (i = 1)

Unclear: Spitzoid melanoma or atypical Spitz tumor (DA+)

4

Yes, 10 mm

No

Regional LN metastases relasped 2 years later

8

H

30

Trunk

5

SRT

Area of common naevi with a central spitzoid clone

p16 clonal, ALK+

No 9p21 deletion, no 4-color melanoma FISH abnormality. CGH: heterozygous deletion of 9p22.3–9p13.2, 10 loss, loss of: 11q14.1-qter, 14q11.2q24.2, 16p12.3p11.2, complex 19p recombinations

Neither FISH technique helped, but CGH was useful (i = 0)

Composite spitzoid nevus (DA) but CGH abnormalities favor malignancy

3

Yes, 5 mm

No

Synchronous discovery of multiple LN, hepatic, pulmonary & pleural metastases; died on immunotherapy and targeted therapy

9

F

27

Leg

2.6

SRT

Nests of spindle cells

p16

No 9p21 deletion, 4-color melanoma FISH harbors CCND1 and RREB1+

9p21 did not help, unlike 4-color melanoma FISH (i = 0)

Unclear: Spitzoid melanoma or atypical Spitz tumor (DA+)

13

Yes

Yes, positive

Remission after sentinel-node positive and lymph-node dissection negative

10

F

11

Leg

2.4

SRT

Nests of epithelioid cells

p16

Heterozygous 9p21 deletion

Finding heterozygous 9p21 did not help; histologically certain melanoma (i = 0)

Spitzoid melanoma (A+)

5

Yes, 20 mm

No

Regional LN invasion 3 months post-diagnosis; after immunotherapy, now in clinical remission

11

F

17

Back

3

OMT: BAP

Nests of epithelioid cells with adjacent common nevus

p16, BAP1 loss in epithelioid cells, BRAFV600E+

Homozygous 9p21 deletion, BRAF p.V600E/E2/D mutation; CGH: chromosomes 3, 9, 7q & 10 lost

9p21 did not help (i = 0)

Invasive melanoma developing on BAP1-inactivated melanocytoma (A+)

a

Yes, 20 mm

Yes, positive (micro-metastasis in 1/3 LNs)

LN and leg muscle invasion 2 years later; died on targeted therapy & immunotherapy

12

F

31

Shoulder

2.2

ATNT

Dense proliferation of monotonous epithelioid cells

p16, β-cat, BAP1+

Heterozygous 9p21 deletion

9p21 heterozygosity did not aid in the diagnosis (i = 0)

Uncertain nevoid melanoma (DA+)

4

Yes, 20 mm

No

Regional LN-metastasis relapse followed by LN dissection in September 2022; currently on immunotherapy

13

H

56

Arm

1.6

ATNT

Ulcerated dense compound lesion of nevoid cells

p16–

Heterozygous 9p21 deletion, 4-color melanoma FISH harbors RREB1 gain and MYB deletion

4-color melanoma FISH confirmed the malignancy (i = 0)

Nevoid melanoma (A+)

5

Yes, 10 mm

No

Surgical excision of a single transit nodule followed by 6 months of adjuvant immunotherapy, stopped because of poor tolerance

14

F

24

Side

2.7

ATNT

Nevoid cells

p16, BRAFV600E–

Homozygous 9p21 deletion, 4-color melanoma FISH harbors RREB1 gain and MYB deletion

Both FISH were consistent with the histological diagnosis (i = 1)

Nevoid melanoma (A+)

10

Yes, 20 mm

Yes, positive

Sentinel-node positive, LN dissection negative and in transit metastases around the scar

15

F

25

Arm

1.3

ATNT

Nevoid cells

p16

Heterozygous 9p21 deletion, 4-color melanoma FISH harbors RREB1 gain; NRAS mutation

9p21 did not help, but 4-color melanoma FISH did (i = 0)

Metastatic nevoid melanoma (A+)

6

Unknown

No

Ovarian metastasis of the arm melanoma; clinical remission after immunotherapy

16

F

48

Leg

3

ATNT

Dense nevoid cell proliferation simulating a nevus

p16, BAP1+, BRAFV600E+, B-cat, PRAME, ALK

Homozygous 9p21 deletion

9p21 led to category switch from DA+ to A+ diagnosis (i = 2)

Nevoid melanoma (A+)

2

Yes, 20 mm

Yes, positive

Sentinel-node positive, LN dissection negative; currently on immunotherapy

17

F

31

Arm

1.5

ATNT

Compound dense nevoid cell proliferation

p16 clonal

No 9p21 deletion, MYB deletion in 4-color melanoma FISH

FISH 9p21 did not aid in the diagnosis (i = 0)

MELTUMP (DA)

3

No

No

Local relapse after initial excision; subsequent re-excision, currently in remission

  1. SRT Spitz–Reed tumor, FISH fluorescence in situ hybridization, A/– atypical, DA+/– doubtful atypical, i impact factor, BRAF v-RAF murine sarcoma viral oncogene homolog B, NRAS neuroblastoma rat-sarcoma viral oncogene, RREB1 Ras-responsive element-binding protein-1, CYP6 cytochrome P450, family 6; MYB myeloblastosis, ALK anaplastic lymphoma kinase, CGH comparative genomic hybridization, OMT melanocytic tumors of uncertain malignant potential (MELTUMP) tumor, BAP breast cancer-1 (BRCA1)-associated protein-1, ATNT atypical thick nevoid tumor, B-cat β-catenin, PRAME preferentially expressed antigen in melanoma, MELTUMP melanocytic tumors of uncertain malignant potential, LN lymph node, NC noncontributory.