Table 3 Missense SNPs identified across four main insecticide resistance associated genes.
Chromosome | Position | Amino acid alteration | Populations* | Allele frequency | Genotype frequency | |||
|---|---|---|---|---|---|---|---|---|
Reference (R) | Alternative (A) | R/R | R/A | A/A | ||||
NC_050202.1 | 60,913,808 | V189I | E, IC & IF | 0.91 | 0.09 | 0.83 | 0.16 | 0.01 |
NC_050202.1 | 60,913,844 | N177D | All | 0.17 | 0.83 | 0.07 | 0.21 | 0.72 |
NC_050202.1 | 60,916,071 | G94S | All | 0.22 | 0.78 | 0.07 | 0.31 | 0.63 |
NC_050202.1 | 60,916,173 | G60S | PC | 0.99 | 0.01 | 0.99 | 0.01 | 0.00 |
NC_050202.1 | 60,916,175 | V59A | All | 0.24 | 0.76 | 0.13 | 0.22 | 0.65 |
NC_050203.1 | 8,349,210 | M349I | PC | 0.99 | 0.01 | 0.99 | 0.01 | 0.00 |
NC_050203.1 | 8,352,962 | V327I | IC & IF | 0.97 | 0.03 | 0.93 | 0.07 | 0.00 |
NC_050203.1 | 8,353,055 | A296S | All | 0.81 | 0.19 | 0.63 | 0.36 | 0.01 |
NC_050203.1 | 8,380,167 | L101S | IC | 0.98 | 0.02 | 0.96 | 0.04 | 0.00 |
NC_050203.1 | 8,391,526 | P77A | Ethiopia | 0.97 | 0.03 | 0.93 | 0.07 | 0.00 |
NC_050203.1 | 8,391,528 | P76Q | IF | 0.99 | 0.01 | 0.97 | 0.03 | 0.00 |
NC_050203.1 | 8,391,529 | P76T | Ethiopia | 0.99 | 0.01 | 0.99 | 0.01 | 0.00 |
NC_050203.1 | 8,395,314 | G74E | IC | 0.95 | 0.05 | 0.90 | 0.10 | 0.00 |
NC_050203.1 | 8,395,317 | Y73C | Ethiopia | 0.96 | 0.04 | 0.93 | 0.06 | 0.01 |
NC_050203.1 | 42,808,541 | A1955C | Ethiopia | 0.96 | 0.04 | 0.97 | 0.03 | 0.00 |
NC_050203.1 | 42,817,709 | L958F | Ethiopia | 0.99 | 0.01 | 0.94 | 0.06 | 0.00 |
NC_050203.1 | 70,580,273 | T222A | E & PC | 0.97 | 0.03 | 0.90 | 0.10 | 0.00 |
NC_050203.1 | 70,581,404 | F196Y | E & PC | 0.95 | 0.05 | 0.08 | 0.06 | 0.86 |
NC_050203.1 | 70,581,440 | I184T | IC | 0.11 | 0.89 | 0.98 | 0.01 | 0.01 |
NC_050203.1 | 70,581,534 | R153C | All | 0.98 | 0.02 | 0.57 | 0.26 | 0.17 |
NC_050203.1 | 70,581,555 | C146S | All | 0.70 | 0.30 | 0.08 | 0.10 | 0.82 |
NC_050203.1 | 70,581,607 | N128R | E & PC | 0.93 | 0.07 | 0.90 | 0.06 | 0.04 |
NC_050203.1 | 70,581,621 | P124T | Ethiopia | 0.98 | 0.02 | 0.96 | 0.04 | 0.00 |
NC_050203.1 | 70,581,766 | H97N | All | 0.21 | 0.79 | 0.14 | 0.14 | 0.72 |
NC_050203.1 | 70,581,858 | G66A | All | 0.24 | 0.76 | 0.18 | 0.11 | 0.71 |
