Table 3 Genes disrupted in the RW line.
From: Establishment and genetic characterization of zebrafish RW line
Chr | Position | SNP | Type | Gene | ID | Amino Acid | Protein name |
---|---|---|---|---|---|---|---|
3 | 29,663,729 | A > C | splice acceptor variant | sult3st1 | ENSDART00000132083.3 | - | Amine sulfotransferase |
3 | 34,053,820 | G > A | stop gained | ighv1-2 | ENSDART00000151590.2 | p.Trp51* | Immunoglobulin zeta heavy chain, partial |
5 | 23,118,472 | G > A | start lost | nexmifa | ENSDART00000149893.2 | p.Met1Ile | Protein KIAA2022-like |
7 | 23,118,472 | G > T | stop gained | nitr3r.1 L | ENSDART00000063629.7 | p.Glu250* | Novel protein similar to lectins |
7 | 17,376,057 | T > A | stop gained | nitr7a | ENSDART00000172272.2 | p.Leu31* | Novel immune-type receptor 7a, allele 2 |
8 | 33,568,960 | T > G | stop gained | mvb12bb | ENSDART00000138921.2 | p.Tyr1* | Family with sequence similarity 125, member B |
9 | 896,199 | G > A | stop gained | steap3 | ENSDART00000139132.3 | p.Trp279* | Metalloreductase STEAP3 |
9 | 925,992 | C > T | stop gained | sctr | ENSDART00000168917.2 | p.Arg439* | Secretin receptor precursor |
9 | 49,048,872 | T > A | stop lost | stk39 | ENSDART00000125090.3 | p.Ter530Arg537* | STE20/SPS1-related proline-alanine-rich protein kinase |
13 | 48,108,452 | G > A | stop gained | golga4 | ENSDART00000193446.1 | p.Trp791* | Golgin subfamily A member 4 |
15 | 5,719,419 | T > C | splice donor variant | urb1 | ENSDART00000190332.1 | - | Nucleolar pre-ribosomal-associated protein 1 |
16 | 27,502,206 | C > T | stop gained | invs | ENSDART00000015688.10 | p.Arg1022* | Inversin |
25 | 17,364,030 | G > T | stop gained | cyp2 × 6 | ENSDART00000064591.6 | p.Gly256* | Cytochrome P450 2 × 6 |