Fig. 4 | Scientific Reports

Fig. 4

From: Multi-locus genome-wide association study reveals genomic regions underlying root system architecture traits early growth stage of sorghum germplasm

Fig. 4

Manhattan plot showing p-values and genome-wide associations for root system architecture all traits (A) root angle, (B) root length, (C) root number, (D) root dry weight, (E) shoot dry weight, (F) root to shoot ratio, (G) leaf area, (H) shoot diameter and I) shoot length …. Each marker median of the − log10(p) values from the multi-locus random-SNP-effect mixed linear model (mrMLM), factored spectrally transformed multi-locus random-SNP-effect MLM (FASTmrMLM), and factored spectrally transformed multi-locus random-SNP-effect efficient mixed-model association (FASTmrEMMA) approaches were used to draw the Manhattan. The dots are indicated by light colors quantitative trait nucleotides (QTNs); all QTNs commonly identified by three approaches are indicated by pink dots with dotted vertical lines.

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