Skip to main content

Thank you for visiting nature.com. You are using a browser version with limited support for CSS. To obtain the best experience, we recommend you use a more up to date browser (or turn off compatibility mode in Internet Explorer). In the meantime, to ensure continued support, we are displaying the site without styles and JavaScript.

Advertisement

Scientific Reports
  • View all journals
  • Search
  • My Account Login
  • Content Explore content
  • About the journal
  • Publish with us
  • Sign up for alerts
  • RSS feed
  1. nature
  2. scientific reports
  3. articles
  4. article
Uncovering the bactericidal potential of extract and multi-targeting phytochemicals from Mirabilis longiflora L. leaves against multidrug-resistant Pseudomonas aeruginosa and Bacillus cereus
Download PDF
Download PDF
  • Article
  • Open access
  • Published: 19 February 2026

Uncovering the bactericidal potential of extract and multi-targeting phytochemicals from Mirabilis longiflora L. leaves against multidrug-resistant Pseudomonas aeruginosa and Bacillus cereus

  • Shahina Akhter1,2 na1,
  • Md. Enamul Kabir Talukder3 na1,
  • Md. Tarikul Islam3 na1,
  • Md. Baha Uddin3,
  • Nafis Fuad Shahir3,
  • Nazia Islam Rafi3,
  • Sadia Israt3,
  • Rahat Alam3,
  • Mohammad Abu Hena Mostofa Jamal4 &
  • …
  • Md. Mashiar Rahman3 

Scientific Reports , Article number:  (2026) Cite this article

  • 755 Accesses

  • Metrics details

We are providing an unedited version of this manuscript to give early access to its findings. Before final publication, the manuscript will undergo further editing. Please note there may be errors present which affect the content, and all legal disclaimers apply.

Subjects

  • Biochemistry
  • Biotechnology
  • Drug discovery
  • Microbiology

Abstract

Mirabilis longiflora L. has been used traditionally in some parts of Bangladesh for the treatment of headaches, infectious diseases, painkillers, skin disease, herpes infection, and wound healing, but its effects on multidrug-resistant (MDR) bacteria have remained unidentified. Therefore, we aimed to determine the antibacterial activity of the methanol extract of M. longiflora L. leaves (MEMLL) against MDR Pseudomonas aeruginosa and Bacillus cereus and to recognize possible multitargeting antibacterial phytocompounds through in silico computational approaches targeting the LasR and LpxC proteins in MDR Pseudomonas aeruginosa and the FosB and PlcR proteins in MDR Bacillus cereus. PPS, FT-IR, and GC-MS were used for profiling of the phytocompounds in MEMLL. The antimicrobial activity of MEMLL was evaluated using in vitro agar-well diffusion, MIC, and MBC assays. In silico methods were applied to identify multi-targeting agents from GC-MS-annotated phytocompounds. MEMLL showed dose-dependent antibacterial activity and exposed the presence of 33 phytochemicals in GC-MS analysis. Among these, 6-Hydroxy-4,4,7a-trimethyl-5,6,7,7a-tetrahydrobenzofuran-2(4 H)-one (CID 14334) was identified as a potential antibacterial phytocompound as it exhibited multi-modal and strong binding affinity towards LasR, LpxC, FosB, and PlcR, favorable pharmacokinetics, drug-likeness, physicochemical, and toxicity properties. Finally, Molecular dynamics (MD) simulations demonstrated the structural stability of CID 14,334 within the active sites of LasR, LpxC, FosB, and PlcR. The results of this study offer scientific validation for the traditional use of M. longiflora L. in bacterial infection-related diseases. It also suggests that 6-Hydroxy-4,4,7a-trimethyl-5,6,7,7a-tetrahydrobenzofuran-2(4 H)-one from M. longiflora L. might be responsible for the antibacterial activity and could act as a phytopharmacological lead for the development of LasR and LpxC inhibitors against MDR Pseudomonas aeruginosa and FosB and PlcR inhibitors against MDR Bacillus cereus.

Similar content being viewed by others

A combined in silico and MD simulation approach to discover novel LpxC inhibitors targeting multiple drug resistant Pseudomonas aeruginosa

Article Open access 15 May 2025

Antimicrobial and antioxidant study of combined essential oils of Anethum Sowa Kurz. and Trachyspermum ammi (L.) along with quality determination, comparative histo-anatomical features, GC‒MS and HPTLC chemometrics

Article Open access 06 November 2024

Efficacy of various extracting solvents on phytochemical composition, and biological properties of Mentha longifolia L. leaf extracts

Article Open access 21 October 2023

Data availability

Available upon reasonable request from the corresponding author.

Abbreviations

MEMLL:

Methanolic Extract of Mirabilis longiflora leaves

MDR:

Multidrug resistance

FT-IR:

Fourier-transform infrared spectroscopy

PPS:

Preliminary phytochemical screening

GC-MS:

Gas chromatography-mass spectrometry

MIC:

Minimum Inhibitory Concentration

MBC:

Minimum Bactericidal Concentration

OPLS3e:

Extending Force Field Coverage for Drug-Like Small Molecules

TIP3P:

Transferable intermolecular potential with 3 points

ADME:

Absorption, Distribution, Metabolism, and Excretion

SID:

Simulation Interaction Diagram

RMSD:

Root mean square deviation

RMSF:

Root mean square fluctuation

Rg:

Radius of gyration

SASA:

Solvent accessible surface area

References

  1. Safdar, N. et al. Economic burden of antimicrobial resistance on patients in Pakistan. Front. Public. Health. 13, 1481212 (2025).

    Google Scholar 

  2. Dadgostar, P. Antimicrobial resistance: Implications and costs. Infect. Drug Resist. 12, 3903–3910 (2019).

    Google Scholar 

  3. Global burden of bacterial antimicrobial resistance. In 2019: A systematic analysis. Lancet 399, 629–655 (2022).

    Google Scholar 

  4. Elbaiomy, R. G. et al. Antibiotic resistance: A genetic and physiological perspective. MedComm 6, e70447 (2025).

  5. Elshobary, M. E. et al. Combating antibiotic resistance: Mechanisms, multidrug-resistant pathogens, and novel therapeutic approaches: An updated review. Pharmaceuticals 18, 402 (2025).

    Google Scholar 

  6. Horcajada, J. P. et al. Epidemiology and treatment of multidrug-resistant and extensively drug-resistant Pseudomonas aeruginosa infections. Clin. Microbiol. Rev. 32, (2019).

  7. Algammal, A. M. et al. Newly emerging MDR B. cereus in Mugil seheli, as the first report, commonly harbor nhe, hbl, cytK, and pc-plc virulence genes and bla1, bla2, tetA, and erm a resistance genes. Infect. Drug Resist. 15, 2167–2185 (2022).

    Google Scholar 

  8. Swain, J. et al. Pathogenicity and virulence of Pseudomonas aeruginosa: Recent advances and under-investigated topics. Virulence 16, 1 (2025).

    Google Scholar 

  9. Kostylev, M. et al. Evolution of the Pseudomonas aeruginosa quorum-sensing hierarchy. Proc. Natl. Acad. Sci. USA. 116, 7027–7032 (2019).

    Google Scholar 

  10. Rutherford, S. T. & Bassler, B. L. Bacterial quorum sensing: Its role in virulence and possibilities for its control. Cold Spring Harb. Perspect. Med. 2, a012427 (2012).

    Google Scholar 

  11. Zhang, X. et al. A comprehensive review of the pathogenic mechanisms of Pseudomonas aeruginosa: Synergistic effects of virulence factors, quorum sensing, and biofilm formation. Front. Microbiol. 16, 1619626 (2025).

    Google Scholar 

  12. Miranda, S. W., Asfahl, K. L., Dandekar, A. A. & Greenberg, E. P. Pseudomonas aeruginosa quorum sensing. In Advances in Experimental Medicine and Biology 1386 95–115 (Springer, 2022).

  13. Abbas, H. A., Shaldam, M. A. & Eldamasi, D. Curtailing quorum sensing in Pseudomonas aeruginosa by sitagliptin. Curr. Microbiol. 77, 1051–1060 (2020).

    Google Scholar 

  14. Krause, K. M. et al. Potent LpxC inhibitors with in vitro activity against multidrug-resistant Pseudomonas aeruginosa. Antimicrob. Agents Chemother. 63, e00977–e00919 (2019).

    Google Scholar 

  15. Alanazi, A. et al. A combined in silico and MD simulation approach to discover novel LpxC inhibitors targeting multidrug-resistant Pseudomonas aeruginosa. Sci. Rep. 15, 16900 (2025).

    Google Scholar 

  16. Wu, Y. et al. Overcoming the drug resistance barrier: Progress in fosfomycin combination therapy against multidrug-resistant pathogens. Front. Microbiol. 16, 1702881 (2025).

    Google Scholar 

  17. Travis, S. et al. Inhibition of fosfomycin resistance protein FosB from Gram-positive pathogens by phosphonoformate. Biochemistry 62, 109–117 (2023).

    Google Scholar 

  18. Qin, J. et al. NupR is involved in the control of plcr: A pleiotropic regulator of extracellular virulence factors. Microorganisms 13, 212 (2025).

    Google Scholar 

  19. Sayem, M. et al. Comprehensive genomic analysis reveals virulence and antibiotic resistance genes in a multidrug-resistant Bacillus cereus isolated from hospital wastewater in Bangladesh. Sci. Rep. 15, 22915 (2025).

    Google Scholar 

  20. Abdallah, E. M., Alhatlani, B. Y., de Paula Menezes, R. & Martins, C. H. G. Back to nature: Medicinal plants as promising sources for antibacterial drugs in the post-antibiotic era. Plants 12, 3077. https://doi.org/10.3390/plants12173077 (2023).

    Google Scholar 

  21. Imon, R. R. et al. Natural defense against multi-drug resistant Pseudomonas aeruginosa: Cassia occidentalis L. in vitro and in silico antibacterial activity. RSC Adv. 13, 28773–28784 (2023).

    Google Scholar 

  22. Malakar Moumita & Biswas, S. Mirabilis: Medicinal uses and conservation. In Floriculture and Ornamental Plants (eds. Datta, S. K. and Gupta, Y. C.) 1–57 (Springer, 2020). https://doi.org/10.1007/978-981-15-1554-5_28-1

  23. Kumar Yadav, S. et al. Extraction, phytochemical investigation, and antiulcer activity of hydroalcoholic extract of Mirabilis longiflora. Indo Am. J. P Sci. 9 (2022).

  24. Rahman, M. M. et al. Mikania cordata leaves extract promotes activity against pathogenic bacteria and anticancer activity in EAC cell-bearing Swiss albino mice. J. Appl. Pharm. Sci. 10, 112–122 (2020).

    Google Scholar 

  25. Zaman, S. B. et al. Evaluation of antibiotic susceptibility in wound infections: A pilot study from Bangladesh. F1000Res 6, (2017).

  26. Rahman, M. M. et al. Unveiling the therapeutic efficacy of extract and multitargeting phytocompounds from Christella dentata (Forssk.) Brownsey & jermy against multidrug-resistant Pseudomonas aeruginosa. RSC Adv. 14, 6096–6111 (2024).

    Google Scholar 

  27. Bhardwaj, S. et al. Molecular simulation-based investigation of thiazole derivatives as potential LasR inhibitors of Pseudomonas aeruginosa. PLoS ONE. 20, e0320841 (2025).

    Google Scholar 

  28. Travis, S. et al. Identification and analysis of small molecule inhibitors of FosB from Staphylococcus aureus. RSC Med. Chem. 14, 947–956 (2023).

    Google Scholar 

  29. Grenha, R. et al. Structural basis for the activation mechanism of the PlcR virulence regulator by the quorum-sensing signal peptide PapR. Proc. Natl. Acad. Sci. USA. 110, 1047–1052 (2013).

    Google Scholar 

  30. Sastry, G. M., Adzhigirey, M., Day, T., Annabhimoju, R. & Sherman, W. Protein and ligand preparation: Parameters, protocols, and influence on virtual screening enrichments. J. Comput. Aided Mol. Des. 27, 221–234 (2013).

    Google Scholar 

  31. Harder, E. et al. OPLS3: A force field providing broad coverage of drug-like small molecules and proteins. J. Chem. Theory Comput. 12, 281–296 (2016).

    Google Scholar 

  32. Talukder, M. E. K. et al. Molecular docking, QSAR, and simulation analyses of EGFR-targeting phytochemicals in non-small cell lung cancer. J. Mol. Struct. 1321, 139924 (2025).

    Google Scholar 

  33. Banerjee, P., Eckert, A. O., Schrey, A. K. & Preissner, R. ProTox-II: A webserver for the prediction of toxicity of chemicals. Nucleic Acids Res. 46, W257–W263 (2018).

    Google Scholar 

  34. Li, Y. et al. Decoding the limits of deep learning in molecular docking for drug discovery. Chem. Sci. 16, 17374–17390 (2025).

    Google Scholar 

  35. De Ferreira, R. & Schapira, M. A systematic analysis of atomic protein-ligand interactions in the PDB. Medchemcomm 8, 1970–1981 (2017).

    Google Scholar 

  36. Shams, W. et al. Pharmacokinetics of drug absorption and metabolism: Mechanisms, influencing factors, and screening strategies in drug development. J. Neonatal Surg. 14, 574–581 (2025).

    Google Scholar 

  37. Ojha, H. et al. Chapter 7 - Chem-bioinformatic approach for drug discovery: In silico screening of potential antimalarial compounds. In Chemoinformatics and Bioinformatics in the Pharmaceutical Sciences (eds Sharma, N., Ojha, H., Raghav, P. K. & Goyal, K.) 207–243 (Academic, 2021). https://doi.org/10.1016/B978-0-12-821748-1.00005-1

  38. Omran, B. A., Tseng, B. S. & Baek, K. H. Nanocomposites against Pseudomonas aeruginosa biofilms: Recent advances, challenges, and future prospects. Microbiol. Res. 282, 127656 (2024).

    Google Scholar 

  39. Fan, Y. et al. Bacillus cereus is a key microbial determinant of intractable otitis media with effusion. Commun. Med. 5, 150 (2025).

    Google Scholar 

  40. Parmanik, A. et al. Current treatment strategies against multidrug-resistant bacteria: A review. Curr. Microbiol. 79, 388 (2022).

    Google Scholar 

  41. Alam, R. et al. GC-MS analysis of phytoconstituents from Ruellia prostrata and Senna Tora and identification of potential anti-viral activity against SARS-CoV-2. RSC Adv. 11, 40120–40135 (2021).

    Google Scholar 

  42. Talukder, M. E. K. et al. Cheminformatics-based identification of phosphorylated RET tyrosine kinase inhibitors for human cancer. Front Chem 12, (2024).

  43. Usha, V., Thangaraj, V. & Thirunarayanan & G. Antimicrobial potent (2E)-3-Chloro-4-Nitro-Phenylchalcones. Indian J. Chem. 56 (2017).

  44. Jayawardena, T. U. et al. Sargassum Horneri and isolated 6-hydroxy-4,4,7a-trimethyl-5,6,7,7a-tetrahydrobenzofuran-2(4H)-one (HTT); LPS-induced inflammation Attenuation via suppressing NF-κB, MAPK, and oxidative stress through Nrf2/HO-1 pathways in RAW 264.7 macrophages. Algal Res. 40 (2019).

  45. Dawra, M. et al. Biological activities and chemical characterization of the Lebanese endemic plant Origanum ehrenbergii Boiss. Flavour. Fragr. J. 36, 339–351 (2021).

    Google Scholar 

  46. Akhter, S. et al. Ruellia prostrata Poir. Activity evaluated by phytoconstituents, antioxidant, anti-inflammatory, antibacterial activity, and in silico molecular functions. J. Saudi Chem. Soc. 26 (2022).

Download references

Acknowledgements

The authors are grateful to the Bangladesh Reference Institute for Chemical Measurements (BRICM) for their support in FT-IR and GC-MS analysis. We would like to thank and are grateful to the Laboratory of Computational Biology (BioSol Centre), Bangladesh, for instrumental support in conducting the dynamics simulation.

Funding

This research received no external funding.

Author information

Author notes
  1. Shahina Akhter, Md. Enamul Kabir Talukder, Md. Tarikul Islam have contributed equally to this work.

Authors and Affiliations

  1. Department of Biochemistry and Biotechnology, University of Science and Technology Chittagong (USTC), Foy’s Lake, Chittagong, 4202, Bangladesh

    Shahina Akhter

  2. Department of Life Sciences, School of Environment and Life Sciences, Independent University Bangladesh (IUB), Bashundhara R/A, Dhaka, 1212, Bangladesh

    Shahina Akhter

  3. Molecular and Cellular Biology Laboratory, Department of Genetic Engineering and Biotechnology, Jashore University of Science and Technology, Jashore, 7408, Bangladesh

    Md. Enamul Kabir Talukder, Md. Tarikul Islam, Md. Baha Uddin, Nafis Fuad Shahir, Nazia Islam Rafi, Sadia Israt, Rahat Alam & Md. Mashiar Rahman

  4. Laboratory of Environmental and Clinical Microbiology, Department of Biotechnology and Genetic Engineering, Islamic University, Kushtia, 7003, Bangladesh

    Mohammad Abu Hena Mostofa Jamal

Authors
  1. Shahina Akhter
    View author publications

    Search author on:PubMed Google Scholar

  2. Md. Enamul Kabir Talukder
    View author publications

    Search author on:PubMed Google Scholar

  3. Md. Tarikul Islam
    View author publications

    Search author on:PubMed Google Scholar

  4. Md. Baha Uddin
    View author publications

    Search author on:PubMed Google Scholar

  5. Nafis Fuad Shahir
    View author publications

    Search author on:PubMed Google Scholar

  6. Nazia Islam Rafi
    View author publications

    Search author on:PubMed Google Scholar

  7. Sadia Israt
    View author publications

    Search author on:PubMed Google Scholar

  8. Rahat Alam
    View author publications

    Search author on:PubMed Google Scholar

  9. Mohammad Abu Hena Mostofa Jamal
    View author publications

    Search author on:PubMed Google Scholar

  10. Md. Mashiar Rahman
    View author publications

    Search author on:PubMed Google Scholar

Contributions

Shahina Akhter: investigation, methodology, formal analysis, writing-original draft. Md. Enamul Kabir Talukder: investigation, data curation, methodology, formal analysis, writing-original draft, writing-review & editing. Md. Tarikul Islam: investigation, methodology, formal analysis, writing-original draft, writing-review & editing. Md. Baha Uddin: investigation, methodology, formal analysis. Nafis Fuad Shahir: investigation, methodology, formal analysis. Nazia Islam Rafi: investigation, methodology, formal analysis. Sadia Israt: investigation, methodology, formal analysis. Rahat Alam: resources, software, writing-review & editing. Mohamad Abu Hena Mostofa Jamal: resources, writing-review & editing. Md. Mashiar Rahman: conceptualization, resources, data curation, validation, supervision, funding acquisition, writing-review & editing.

Corresponding author

Correspondence to Md. Mashiar Rahman.

Ethics declarations

Competing interests

The authors declare no competing interests.

Additional information

Publisher’s note

Springer Nature remains neutral with regard to jurisdictional claims in published maps and institutional affiliations.

Supplementary Information

Below is the link to the electronic supplementary material.

Supplementary Material 1

Rights and permissions

Open Access This article is licensed under a Creative Commons Attribution-NonCommercial-NoDerivatives 4.0 International License, which permits any non-commercial use, sharing, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if you modified the licensed material. You do not have permission under this licence to share adapted material derived from this article or parts of it. The images or other third party material in this article are included in the article’s Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by-nc-nd/4.0/.

Reprints and permissions

About this article

Check for updates. Verify currency and authenticity via CrossMark

Cite this article

Akhter, S., Talukder, M.E.K., Islam, M.T. et al. Uncovering the bactericidal potential of extract and multi-targeting phytochemicals from Mirabilis longiflora L. leaves against multidrug-resistant Pseudomonas aeruginosa and Bacillus cereus. Sci Rep (2026). https://doi.org/10.1038/s41598-026-40444-3

Download citation

  • Received: 08 July 2025

  • Accepted: 12 February 2026

  • Published: 19 February 2026

  • DOI: https://doi.org/10.1038/s41598-026-40444-3

Share this article

Anyone you share the following link with will be able to read this content:

Sorry, a shareable link is not currently available for this article.

Provided by the Springer Nature SharedIt content-sharing initiative

Keywords

  • Mirabilis longiflora
  • MDR Pseudomonas aeruginosa
  • MDR Bacillus cereus
  • LasR
  • LpxC
  • FosB
  • PlcR
Download PDF

Associated content

Collection

Antimicrobial resistance: a silent pandemic

Advertisement

Explore content

  • Research articles
  • News & Comment
  • Collections
  • Subjects
  • Follow us on Facebook
  • Follow us on X
  • Sign up for alerts
  • RSS feed

About the journal

  • About Scientific Reports
  • Contact
  • Journal policies
  • Guide to referees
  • Calls for Papers
  • Editor's Choice
  • Journal highlights
  • Open Access Fees and Funding

Publish with us

  • For authors
  • Language editing services
  • Open access funding
  • Submit manuscript

Search

Advanced search

Quick links

  • Explore articles by subject
  • Find a job
  • Guide to authors
  • Editorial policies

Scientific Reports (Sci Rep)

ISSN 2045-2322 (online)

nature.com sitemap

About Nature Portfolio

  • About us
  • Press releases
  • Press office
  • Contact us

Discover content

  • Journals A-Z
  • Articles by subject
  • protocols.io
  • Nature Index

Publishing policies

  • Nature portfolio policies
  • Open access

Author & Researcher services

  • Reprints & permissions
  • Research data
  • Language editing
  • Scientific editing
  • Nature Masterclasses
  • Research Solutions

Libraries & institutions

  • Librarian service & tools
  • Librarian portal
  • Open research
  • Recommend to library

Advertising & partnerships

  • Advertising
  • Partnerships & Services
  • Media kits
  • Branded content

Professional development

  • Nature Awards
  • Nature Careers
  • Nature Conferences

Regional websites

  • Nature Africa
  • Nature China
  • Nature India
  • Nature Japan
  • Nature Middle East
  • Privacy Policy
  • Use of cookies
  • Legal notice
  • Accessibility statement
  • Terms & Conditions
  • Your US state privacy rights
Springer Nature

© 2026 Springer Nature Limited

Nature Briefing: Translational Research

Sign up for the Nature Briefing: Translational Research newsletter — top stories in biotechnology, drug discovery and pharma.

Get what matters in translational research, free to your inbox weekly. Sign up for Nature Briefing: Translational Research