Table 9 Run time K562
From: A large-scale benchmark for network inference from single-cell perturbation data
Model | Run time (hours) |
|---|---|
SparseRC | 0.004 |
GRNBoost + TF | 0.012 |
SCENIC | 0.046 |
Sortnregress | 0.087 |
Mean Difference (top 5k) | 0.094 |
Mean Difference (top 1k) | 0.094 |
GRNBoost | 0.097 |
Catran | 0.197 |
GIES | 0.824 |
DCDFG-MLP | 1.087 |
DCDI-DSF | 1.575 |
PC | 1.672 |
NOTEARS (MLP,L1) | 1.705 |
Guanlab (top 5k) | 2.921 |
Guanlab (top 1k) | 3.113 |
GES | 3.148 |
NOTEARS (Linear,L1) | 4.974 |
DCDI-G | 5.043 |
NOTEARS (Linear) | 6.297 |
NOTEARS (MLP) | 10.778 |
Betterboost | 11.934 |
