Table 1 Strains and plasmids used in this study
From: T3SS effector EseJ in Edwardsiella piscicida inhibits PANoptosis in macrophages
Strains or plasmids | Description and/or genotype | Reference or source |
---|---|---|
Bacteria | Â | Â |
E. piscicida | Â | Â |
PPD130/91 | Wild type, Kms, Colr, Amps, LD50 = 105.2 | |
ΔeseJ | in-frame deletion 1–1359 aa of EseJ, PPD130/91 | |
ΔeseJ[eseJ] | ΔeseJ with pACYC-eseJ-HA, PPD130/91 | |
WT/GFP | PPD130/91 with pFPV25.1 | |
ΔeseJ/GFP | ΔeseJ with pFPV25.1 | |
ΔeseJ[eseJ]/GFP | ΔeseJ[eseJ] with pFPV25.1 | |
ΔfimA | in-frame deletion 1–178 aa of FimA, PPD130/91 | |
ΔfimH | in-frame deletion 1–357 aa of FimH, PPD130/91 | |
ΔeseJΔfimA | in-frame deletion of EseJ and FimA, PPD130/91 | |
ΔeseJΔfimH | in-frame deletion of EseJ and FimH, PPD130/91 | |
ΔfimH[eseJ] | ΔfimH with pACYC-eseJ-HA, PPD130/91 | This study |
E. coli | Â | Â |
DH5α | α complementation | Stratagene |
Plasmids | Â | Â |
pFPV25.1 | Derivative of pBR322, gfpmut3A under constitutive promoter | |
pACYC-eseJ -HA | pACYC184 with eseJ-HA, Tetr | |
pLVX-caspase-8 siRNA | pLVX-shRNA2-Puro with RNAi sequence of caspase-8, Ampr | This study |
pLVX-nlrp3 siRNA | pLVX-shRNA2-Puro with RNAi sequence of nlrp3, Ampr | This study |
pLVX-control siRNA | pLVX-shRNA2-Puro with scrambled sequence, Ampr | This study |
pMD2.g | Lentiviral envelope vector, Ampr | |
pSPAX2 | Lentiviral packaging vector, Ampr | |
pLVX-shRNA2-Puro | Lentiviral expression vector expressing a small hairpin RNA for RNA interference, Ampr | Fenghuibio |