Extended Data Fig. 8: Differential gene expression of faecal washes between control and mice pertubation.
From: The cellular states and fates of shed intestinal cells
Volcano plot showing differentially expressed genes between large intestine faecal wash in control (CT) and DSS (a) or ABX and CT (b), each dot is a gene, x-axis is the log2- ratio of expression between faecal wash and tissue, y axis is –log10 (q value), where p value is computed using 2-sided Wilcoxon rank-sum tests and q- values computed using Benjamini- Hochberg FDR correction. Genes with corresponding q-values below 0.05 and fold change garter than 1.5 are marked in red or blue for treatment or control elevated genes respectively. Names of representative up-regulated genes are shown in red or blue for treatment or control respectively.
