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Showing 1–50 of 115 results
Advanced filters: Author: Ashley Stack Clear advanced filters
  • InterpolAI leverages optimal flow-based artificial intelligence to produce synthetic images between pairs of images for diverse three-dimensional image types. InterpolAI is more robust and accurate than existing methods, improving data quality for downstream analysis.

    • Saurabh Joshi
    • André Forjaz
    • Denis Wirtz
    ResearchOpen Access
    Nature Methods
    Volume: 22, P: 1556-1567
  • The placenta plays vital roles in supporting fetal development. Here, Richards et al. develop a high-throughput bioprinted trophoblast organoid model to recapitulate the microenvironment of the early placenta, enabling investigation of placenta development and evaluation of therapeutics for placenta dysfunction disorders.

    • Claire Richards
    • Hao Chen
    • Lana McClements
    ResearchOpen Access
    Nature Communications
    Volume: 16, P: 1-19
  • Anode-free batteries are cost effective but limited by unstable anode morphology and interface reactions. Here the authors discuss design parameters and construct an anode-free sodium solid-state battery using compressed aluminium particles as the anode current collector to improve cycling performance.

    • Grayson Deysher
    • Jin An Sam Oh
    • Ying Shirley Meng
    Research
    Nature Energy
    Volume: 9, P: 1161-1172
  • Imaging macrophage trafficking in solid tumors has implications for cancer diagnosis and prognosis. by labeling macrophages with lipid-shelled microbubbles in combination with ultrasound, the authors here achieve nondestructive in vivo intravenously administrated macrophage imaging at single cell level with 100 µm resolution till 8 h in solid tumors in rodents.

    • Ashley Alva
    • Chulyong Kim
    • Costas Arvanitis
    ResearchOpen Access
    Nature Communications
    Volume: 16, P: 1-16
  • High-power mechanical energy harvesting could be an alternative to batteries, but efficient energy conversion technology has been missing. Here, a novel mechanical-to-electrical energy conversion method is described that is based on reverse electrowetting and is uniquely suited for high-power energy harvesting.

    • Tom Krupenkin
    • J. Ashley Taylor
    ResearchOpen Access
    Nature Communications
    Volume: 2, P: 1-8
  • Wang, Tang and colleagues develop the low-signal signed iterative random forest pipeline to investigate epistasis in the genetic control of cardiac hypertrophy, identifying epistatic variants near CCDC141, IGF1R, TTN and TNKS loci, and show that hypertrophy in induced pluripotent stem cell-derived cardiomyocytes is nonadditively influenced by interactions among CCDC141, TTN and IGF1R.

    • Qianru Wang
    • Tiffany M. Tang
    • Euan A. Ashley
    ResearchOpen Access
    Nature Cardiovascular Research
    Volume: 4, P: 740-760
  • Above band-gap photovoltage could be achieved in materials with a net polarization. Here, Cooket al. compute the contribution to the shift current from the band edge and identify two classes of shift current photovoltaics materials, GeS and ferroelectric polymer films.

    • Ashley M. Cook
    • Benjamin M. Fregoso
    • Joel E. Moore
    ResearchOpen Access
    Nature Communications
    Volume: 8, P: 1-9
  • Through analysis of developing chick embryos and in vitro differentiation of embryonic stem cells, a study develops a method to generate a model of the human trunk with a notochord.

    • Tiago Rito
    • Ashley R. G. Libby
    • James Briscoe
    ResearchOpen Access
    Nature
    Volume: 637, P: 673-682
  • Growth and differentiation of pulmonary epithelial cells is precisely controlled to form the alveoli that create the gas exchange region of the lung. Here, the authors demonstrate that epigenetic modulation of the genome by PRDM3/16 mediates NKX2-1 activity to control alveolar cell fate and differentiation during embryonic and perinatal lung development.

    • Hua He
    • Sheila M. Bell
    • Jeffrey A. Whitsett
    ResearchOpen Access
    Nature Communications
    Volume: 15, P: 1-17
  • Quantitative multimodal 3D reconstruction of human pancreatic tissue at single-cell resolution reveals a high burden of multifocal, genetically heterogeneous pancreatic intraepithelial neoplasias in the normal adult pancreas.

    • Alicia M. Braxton
    • Ashley L. Kiemen
    • Laura D. Wood
    Research
    Nature
    Volume: 629, P: 679-687
  • Raman and fluorescence spectra, consistent with several species of aromatic organic molecules, are reported in the Crater Floor sequences of Jezero crater, Mars, suggesting multiple mechanisms of organic synthesis, transport, or preservation.

    • Sunanda Sharma
    • Ryan D. Roppel
    • Anastasia Yanchilina
    ResearchOpen Access
    Nature
    Volume: 619, P: 724-732
  • The authors report that MeCP2, a methyl DNA–binding transcriptional regulator, modulates the response to amphetamine in the nucleus accumbens. Using both acute viral manipulation of MeCP2 in mice and hypomorphic Mecp2 mutant mice, they find that MeCp2 both affects mesolimbocortical circuit development and regulates the responses to psychostimulants.

    • Jie V Deng
    • Ramona M Rodriguiz
    • Anne E West
    Research
    Nature Neuroscience
    Volume: 13, P: 1128-1136
  • A climatic record from desert speleothems shows that the central Arabian interior experienced recurrent humid intervals over the past 8 million years, which likely facilitated mammalian dispersals between Africa and Eurasia.

    • Monika Markowska
    • Hubert B. Vonhof
    • Gerald H. Haug
    ResearchOpen Access
    Nature
    Volume: 640, P: 954-961
  • Large language models can be manipulated to generate misinformation by poisoning of a very small percentage of the data on which they are trained, but a harm mitigation strategy using biomedical knowledge graphs can offer a method for addressing this vulnerability.

    • Daniel Alexander Alber
    • Zihao Yang
    • Eric Karl Oermann
    ResearchOpen Access
    Nature Medicine
    Volume: 31, P: 618-626
  • This study shows that typhoid toxin disrupts the blood–brain barrier leading to vascular leakage, inflammation and neurological symptoms, causing encephalopathy in typhoid fever. Corticosteroids help mitigate these effects.

    • Heng Zhao
    • Jonatas Catarino
    • Jorge E. Galán
    Research
    Nature Microbiology
    Volume: 10, P: 1340-1351
  • FlyWire presents a neuronal wiring diagram of the whole fly brain with annotations for cell types, classes, nerves, hemilineages and predicted neurotransmitters, with data products and an open ecosystem to facilitate exploration and browsing.

    • Sven Dorkenwald
    • Arie Matsliah
    • Meet Zandawala
    ResearchOpen Access
    Nature
    Volume: 634, P: 124-138
  • The APOBEC3 family cytidine deaminases with antiviral activity are proteins that catalyze the deamination of newly reverse-transcribed viral DNA. Here the authors present the crystal structure of full-length pig-tailed macaque APOBEC3H with bound RNA, which reveals how the APOBEC3H dimer binds around a short RNA duplex.

    • Jennifer A. Bohn
    • Keyur Thummar
    • Janet L. Smith
    ResearchOpen Access
    Nature Communications
    Volume: 8, P: 1-9
  • ZO-1, a cell junction protein, is essential for angiogenesis. Here the authors identify in endothelial cells unexpected associations of ZO-1 with stress granule proteins, such as YB-1, that are crucial for cytoprotection, implicating the ZO-1-YB-1 interaction in angiogenesis.

    • Yassine El Bakkouri
    • Rony Chidiac
    • Jean-Philippe Gratton
    ResearchOpen Access
    Nature Communications
    Volume: 15, P: 1-19
  • The use of NISQ devices for useful quantum simulations of materials and chemistry is still mainly limited by the necessary circuit depth. Here, the authors propose to combine classically-generated effective Hamiltonians, hybrid fermion-to-qubit mapping and circuit optimisations to bring this requirement closer to experimental feasibility.

    • Laura Clinton
    • Toby Cubitt
    • Evan Sheridan
    ResearchOpen Access
    Nature Communications
    Volume: 15, P: 1-12
  • Lamin mutations responsible for muscular dystrophy are shown to reduce nuclear envelope stability, resulting in mechanically induced nuclear envelope rupture, DNA damage and activation of DNA damage response pathways that lead to muscle cell death. Preventing nuclear envelope damage by reducing cytoskeletal forces on the nucleus improves muscle fibre health and function.

    • Ashley J. Earle
    • Tyler J. Kirby
    • Jan Lammerding
    Research
    Nature Materials
    Volume: 19, P: 464-473
  • The cryo-EM structure of human polycystin-2 (PC2) in a closed conformation reveals a domain located above the pore filter, forming an upper vestibule and making contacts with the pore and voltage-sensor-like domains.

    • Mariana Grieben
    • Ashley C W Pike
    • Elisabeth P Carpenter
    Research
    Nature Structural & Molecular Biology
    Volume: 24, P: 114-122
  • l-Lactate is increasingly recognized as a key metabolite and signalling molecule in mammals, but the methods to investigate it in vivo have been limited. Here, authors report a pair of improved biosensors—one green and one red—for visualizing l-lactate both inside and outside of cells.

    • Yusuke Nasu
    • Abhi Aggarwal
    • Robert E. Campbell
    ResearchOpen Access
    Nature Communications
    Volume: 14, P: 1-17
  • Using single-molecule super-resolution microscopy, researchers revealed that Tau controls the recycling pool of synaptic vesicles in hippocampal neurons by forming nanoscale biomolecular condensates that are dynamically regulated by neuronal activity.

    • Shanley F. Longfield
    • Mahdie Mollazade
    • Ramón Martínez-Mármol
    ResearchOpen Access
    Nature Communications
    Volume: 14, P: 1-20
  • Dopaminergic circuits in the nucleus accumbens regulate reward, including social play behavior in adolescent rodents. Here, the authors show that in male but not female rats, dopamine receptors are tagged by complement for microglial phagocytosis, thus mediating changes in social behavior.

    • Ashley M. Kopec
    • Caroline J. Smith
    • Staci D. Bilbo
    ResearchOpen Access
    Nature Communications
    Volume: 9, P: 1-16
  • Two below-threshold surface code memories on superconducting processors markedly reduce logical error rates, achieving high efficiency and real-time decoding, indicating potential for practical large-scale fault-tolerant quantum algorithms.

    • Rajeev Acharya
    • Dmitry A. Abanin
    • Nicholas Zobrist
    ResearchOpen Access
    Nature
    Volume: 638, P: 920-926
  • A head-to-head double-ring complex of the human multifunctional DNA repair protein RAD52 mediates protection of stalled replication forks during replication stress, protecting them from reversal by SMARCAL1 motor.

    • Masayoshi Honda
    • Mortezaali Razzaghi
    • Maria Spies
    Research
    Nature
    Volume: 641, P: 512-519
  • Rational design has endowed self-assembling peptides with structural similarities to natural materials, but recreating the dynamic functional properties inherent to natural systems remains challenging. Here the authors report the discovery of a short peptide based on the tryptophan zipper motif, that shows multiscale hierarchical ordering into hydrogels that display emergent dynamic properties.

    • Ashley K. Nguyen
    • Thomas G. Molley
    • Kristopher A. Kilian
    ResearchOpen Access
    Nature Communications
    Volume: 14, P: 1-13
  • The structures of the biotin-dependent carboxylases have revealed details of their function. Here, the authors describe the first structure of Pseudomonasgeranyl-CoA carboxylase, and compare it with the previously characterised homologous 3-methylcrotonyl-CoA carboxylase.

    • Ashley R. Jurado
    • Christine S. Huang
    • Liang Tong
    ResearchOpen Access
    Nature Communications
    Volume: 6, P: 1-8
  • Mapping of the global potential of atmospheric water harvesting using solar energy shows that it could provide safely managed drinking water for a billion people worldwide based on climate suitability.

    • Jackson Lord
    • Ashley Thomas
    • Philipp H. Schmaelzle
    ResearchOpen Access
    Nature
    Volume: 598, P: 611-617
  • Clathrin light chain (CLC) subunits are dispensable for clathrin-mediated endocytosis of a number of cargoes. Majeed et al. report that CLCs are however required for gyrating-clathrin-dependent recycling of inactive β1-integrins, the absence of which impairs cell migration.

    • Sophia R. Majeed
    • Lavanya Vasudevan
    • Frances M. Brodsky
    ResearchOpen Access
    Nature Communications
    Volume: 5, P: 1-14
  • TMEM16K is a member of the TMEM16 family of integral membrane proteins that are either lipid scramblases or chloride channels. Here the authors combine cell biology, electrophysiology measurements, X-ray crystallography, cryo-EM and MD simulations to structurally characterize TMEM16K and show that it is an ER-resident lipid scramblase.

    • Simon R. Bushell
    • Ashley C. W. Pike
    • Elisabeth P. Carpenter
    ResearchOpen Access
    Nature Communications
    Volume: 10, P: 1-16
  • Aminoadamantane compounds, delivered to cells via binding to viroporin channels, induce S-nitrosylation of the ACE2 protein, inhibiting binding to SARS-CoV-2 spike protein and viral infection.

    • Chang-ki Oh
    • Tomohiro Nakamura
    • Stuart A. Lipton
    Research
    Nature Chemical Biology
    Volume: 19, P: 275-283
  • The prevalence of centrosome amplification (CA) and the genomic landscape of chromosomal instability in high-grade serous ovarian carcinoma (HGSOC) remain to be explored. Here the authors suggest CA as a potential driver of tumour evolution and a biomarker for treatment response in HGSOC.

    • Carolin M. Sauer
    • James A. Hall
    • James D. Brenton
    ResearchOpen Access
    Nature Communications
    Volume: 14, P: 1-20
  • The DNA-binding domains of transcription factors have been well characterized, but whether their intrinsically disordered regions control cell fate is unclear. Here, the authors show the functional and mechanistic importance of an intrinsically disordered region of TCF-1 in T cell development.

    • Naomi Goldman
    • Aditi Chandra
    • Golnaz Vahedi
    Research
    Nature Immunology
    Volume: 24, P: 1698-1710