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Showing 51–100 of 783 results
Advanced filters: Author: Bin Su Clear advanced filters
  • Using an experimental simulator of the extended Hubbard model with spin–valley isospins arising in chiral-stacked twisted double bilayer graphene, the presence of highly tunable quantum criticalities is demonstrated.

    • Qiao Li
    • Bin Cheng
    • Feng Miao
    ResearchOpen Access
    Nature
    Volume: 609, P: 479-484
  • SNARE protein-mediated vesicle fusion is usually monitored by indirect lipid mixing. Diaoet al. have developed a FRET-based single-vesicle content mixing assay, which elucidates fusion pore formation, and shows that the yeast SNARE complex mediates pore expansion in the absence of accessory proteins.

    • Jiajie Diao
    • Zengliu Su
    • Taekjip Ha
    Research
    Nature Communications
    Volume: 1, P: 1-6
  • The characterization of 4,645 whole-genome and 19,184 exome sequences, covering most types of cancer, identifies 81 single-base substitution, doublet-base substitution and small-insertion-and-deletion mutational signatures, providing a systematic overview of the mutational processes that contribute to cancer development.

    • Ludmil B. Alexandrov
    • Jaegil Kim
    • Christian von Mering
    ResearchOpen Access
    Nature
    Volume: 578, P: 94-101
  • Viral pathogen load in cancer genomes is estimated through analysis of sequencing data from 2,656 tumors across 35 cancer types using multiple pathogen-detection pipelines, identifying viruses in 382 genomic and 68 transcriptome datasets.

    • Marc Zapatka
    • Ivan Borozan
    • Christian von Mering
    ResearchOpen Access
    Nature Genetics
    Volume: 52, P: 320-330
  • This study highlights the role Polar regions as a limiting factor in global sustainability due to teleconnection effects, and then propose a SDG target, key indicators, and emphasize Indigenous inclusion and global action.

    • Xin Li
    • Huadong Guo
    • Bin Cao
    ResearchOpen Access
    Nature Communications
    Volume: 16, P: 1-11
  • Controlling phase transitions in MoOx semiconductors is challenging. Here, the authors develop a lab-on-device system to modulate proton intercalation, achieving conductance modulation and enabling electrochemical memory and neural network applications.

    • Xiaoci Liang
    • Dongyue Su
    • Yang Chai
    ResearchOpen Access
    Nature Communications
    Volume: 16, P: 1-12
  • Controlled doping of organic semiconductors is required to enhance charge injection in organic electronics, but the lack of suitable n-dopants with small ionization energy remains elusive. Here, the authors report air-stable metals that act as strong n-dopants in molecules with chelating ligands.

    • Zhengyang Bin
    • Guifang Dong
    • Lian Duan
    ResearchOpen Access
    Nature Communications
    Volume: 10, P: 1-7
  • There’s an emerging body of evidence to show how biological sex impacts cancer incidence, treatment and underlying biology. Here, using a large pan-cancer dataset, the authors further highlight how sex differences shape the cancer genome.

    • Constance H. Li
    • Stephenie D. Prokopec
    • Christian von Mering
    ResearchOpen Access
    Nature Communications
    Volume: 11, P: 1-24
  • With the generation of large pan-cancer whole-exome and whole-genome sequencing projects, a question remains about how comparable these datasets are. Here, using The Cancer Genome Atlas samples analysed as part of the Pan-Cancer Analysis of Whole Genomes project, the authors explore the concordance of mutations called by whole exome sequencing and whole genome sequencing techniques.

    • Matthew H. Bailey
    • William U. Meyerson
    • Christian von Mering
    ResearchOpen Access
    Nature Communications
    Volume: 11, P: 1-27
  • A novel covalent inhibitor, ISM3312, targets the main protease of multiple human coronaviruses, including drug-resistant strains, and shows broad antiviral activity. It offers a promising therapeutic strategy against current and future coronavirus threats.

    • Jing Sun
    • Deheng Sun
    • Jincun Zhao
    ResearchOpen Access
    Nature Communications
    Volume: 16, P: 1-20
  • Gene-edited mouse models are crucial for disease research but remain challenging to create. Here, authors introduce the CRISPR-VIM, using virus-like particles to efficiently deliver CRISPR tools into zygotes without physical damage, streamlining the creation of genetically engineered mouse models.

    • Tae Yeong Jeong
    • Da Eun Yoon
    • Kyoungmi Kim
    ResearchOpen Access
    Nature Communications
    Volume: 16, P: 1-13
  • Flexible materials with mechano-responsive luminescence has gained interest for their potential in sensing devices. Here, the authors demonstrate targeted folding under high compressive strains, which, together with the oxygen quenching of fluorophores, forms the basis for topo-optical sensing.

    • Cong Wang
    • Ding Wang
    • Ben Bin Xu
    ResearchOpen Access
    Nature Communications
    Volume: 11, P: 1-7
  • Fullerene cages that break the isolated pentagon rule are rare and often unstable. Now a range of fullerenes that feature three sequentially fused pentagons of carbon have been stabilized by chlorination.

    • Yuan-Zhi Tan
    • Jia Li
    • Lan-Sun Zheng
    Research
    Nature Chemistry
    Volume: 2, P: 269-273
  • A wax-aided immersion methodology is developed to yield graphene rolls with tunable chiral angles; these graphene rolls exhibit promising chiral electronic properties beyond those of other carbon allotropes.

    • Enbing Zhang
    • Shuaishuai Ding
    • Wenping Hu
    Research
    Nature Materials
    Volume: 24, P: 377-383
  • Understanding deregulation of biological pathways in cancer can provide insight into disease etiology and potential therapies. Here, as part of the PanCancer Analysis of Whole Genomes (PCAWG) consortium, the authors present pathway and network analysis of 2583 whole cancer genomes from 27 tumour types.

    • Matthew A. Reyna
    • David Haan
    • Christian von Mering
    ResearchOpen Access
    Nature Communications
    Volume: 11, P: 1-17
  • In somatic cells the mechanisms maintaining the chromosome ends are normally inactivated; however, cancer cells can re-activate these pathways to support continuous growth. Here, the authors characterize the telomeric landscapes across tumour types and identify genomic alterations associated with different telomere maintenance mechanisms.

    • Lina Sieverling
    • Chen Hong
    • Christian von Mering
    ResearchOpen Access
    Nature Communications
    Volume: 11, P: 1-13
  • Whole-genome sequencing data from more than 2,500 cancers of 38 tumour types reveal 16 signatures that can be used to classify somatic structural variants, highlighting the diversity of genomic rearrangements in cancer.

    • Yilong Li
    • Nicola D. Roberts
    • Christian von Mering
    ResearchOpen Access
    Nature
    Volume: 578, P: 112-121
  • Analysis of cancer genome sequencing data has enabled the discovery of driver mutations. Here, as part of the ICGC/TCGA Pan-Cancer Analysis of Whole Genomes (PCAWG) Consortium the authors present DriverPower, a software package that identifies coding and non-coding driver mutations within cancer whole genomes via consideration of mutational burden and functional impact evidence.

    • Shimin Shuai
    • Federico Abascal
    • Christian von Mering
    ResearchOpen Access
    Nature Communications
    Volume: 11, P: 1-12
  • Whole-genome sequencing data for 2,778 cancer samples from 2,658 unique donors across 38 cancer types is used to reconstruct the evolutionary history of cancer, revealing that driver mutations can precede diagnosis by several years to decades.

    • Moritz Gerstung
    • Clemency Jolly
    • Christian von Mering
    ResearchOpen Access
    Nature
    Volume: 578, P: 122-128
  • The authors present SVclone, a computational method for inferring the cancer cell fraction of structural variants from whole-genome sequencing data.

    • Marek Cmero
    • Ke Yuan
    • Christian von Mering
    ResearchOpen Access
    Nature Communications
    Volume: 11, P: 1-15
  • Many tumours exhibit hypoxia (low oxygen) and hypoxic tumours often respond poorly to therapy. Here, the authors quantify hypoxia in 1188 tumours from 27 cancer types, showing elevated hypoxia links to increased mutational load, directing evolutionary trajectories.

    • Vinayak Bhandari
    • Constance H. Li
    • Christian von Mering
    ResearchOpen Access
    Nature Communications
    Volume: 11, P: 1-10
  • Multi-omics datasets pose major challenges to data interpretation and hypothesis generation owing to their high-dimensional molecular profiles. Here, the authors develop ActivePathways method, which uses data fusion techniques for integrative pathway analysis of multi-omics data and candidate gene discovery.

    • Marta Paczkowska
    • Jonathan Barenboim
    • Christian von Mering
    ResearchOpen Access
    Nature Communications
    Volume: 11, P: 1-16
  • Gestational diabetes milletus (GDM) may have impairments on offspring health. Here, the authors suggest that the increase of EZH2 is an important reason for the disrupted DNA methylome in oocytes exposed to GDM, which may be associated with the transgenerational inheritance of the metabolic disorders.

    • Hong-Yan Guo
    • Shou-Bin Tang
    • Zhao-Jia Ge
    ResearchOpen Access
    Nature Communications
    Volume: 16, P: 1-17
  • Succinylation of PD-L1 by carnitine palmitoyltransferase 1A (CPT1A) in melanoma leads to its degradation and enhanced T cell-dependent killing in vitro. Increasing CPT1A levels synergizes with anti-CTLA-4 treatment to suppress tumor growth in a mouse melanoma model.

    • Long Liang
    • Xinwei Kuang
    • Xiang Chen
    ResearchOpen Access
    Nature Genetics
    Volume: 57, P: 680-693
  • Researchers exploit atomic quantum state control in a fully integrated photonic atomic spectroscopy chip to reduce the group velocity of light by a factor of 1,200 — the lowest group velocity ever reported for a solid-state material. The findings will enable the creation of on-chip nonlinear optical devices with enhanced quantum coherence operating at ultralow power levels.

    • Bin Wu
    • John F. Hulbert
    • Holger Schmidt
    Research
    Nature Photonics
    Volume: 4, P: 776-779
  • Predicting the drug response of patients with cancer is crucial for implementing targeted therapy. Here, Su et al. make patient-derived cell lines and perform targeted sequencing and RNA-seq to identify CDKN2A/2B loss as a predictor of response to CDK4/6 inhibitors in esophageal squamous cell carcinoma.

    • Dan Su
    • Dadong Zhang
    • Weimin Mao
    ResearchOpen Access
    Nature Communications
    Volume: 10, P: 1-13
  • Detecting spatially variable genes (SVGs) is a key challenge in spatial transcriptomics. Here, the authors present STANCE, a statistical model leveraging gene expression, spatial location, and cell type composition to identify SVGs and cell type-specific SVGs with rotation-invariant results using a two-stage testing approach.

    • Haohao Su
    • Yuesong Wu
    • Yuehua Cui
    ResearchOpen Access
    Nature Communications
    Volume: 16, P: 1-17
  • Serine/threonine kinases (STKs) regulate the synthesis of capsular polysaccharide in bacteria through unclear mechanisms. Here, Tang et al. identify a protein that is phosphorylated by an STK and modulates the activity of a phosphoregulatory system in Streptococcus suis, thus linking STKs to capsular polysaccharide synthesis.

    • Jinsheng Tang
    • Mengru Guo
    • Hongjie Fan
    ResearchOpen Access
    Nature Communications
    Volume: 14, P: 1-22
  • Confidently separating the photothermal effect from the generation of energetic charge carriers and quantifying their relative contribution to chemical reactions remain a great challenge in plasmon-mediated chemical reactions. Here, authors describe a strategy based on the construction of a plasmonic electrode coupled with photoelectrochemistry to quantitatively disentangle these two effects.

    • Chao Zhan
    • Bo-Wen Liu
    • Zhong-Qun Tian
    ResearchOpen Access
    Nature Communications
    Volume: 10, P: 1-8
  • Some materials can display magnetic order despite having spin-singlet ground state on individual magnetic sites. This arises due to exchange interactions mixing excited crystal electric field states. Here, Gao et al study and example of such a system, Ni2Mo3O8, and find that crystal electric field states in both the paramagnetic and antiferromagnetic states exhibit dispersive excitations.

    • Bin Gao
    • Tong Chen
    • Pengcheng Dai
    ResearchOpen Access
    Nature Communications
    Volume: 14, P: 1-9
  • Bioresorbable neural implants offer a promising solution to the challenges of secondary surgeries required for the removal of implanted devices. Here, the authors introduce a fully bioresorbable flexible hybrid opto-electronic system for simultaneous electrophysiological recording and optogenetic stimulation.

    • Myeongki Cho
    • Jeong-Kyu Han
    • Ki Jun Yu
    ResearchOpen Access
    Nature Communications
    Volume: 15, P: 1-16
  • Manipulation of controllable polarization evolutions is a big challenge. The authors fabricate the irregular moirés, identifying three distinct types of moiré domains with different patterns, modulating them by external mechanical force disturbing.

    • Zhao Guan
    • Lu-qi Wei
    • Ni Zhong
    ResearchOpen Access
    Nature Communications
    Volume: 16, P: 1-7
  • Molecular catalysts provide an ideal model system to investigate the relationship between active site structure and catalytic performance. Here, the authors explore how electrochemical CO reduction to methanol can be controlled through modification of the active cobalt site in cobalt phthalocyanine.

    • Jie Ding
    • Zhiming Wei
    • Bin Liu
    ResearchOpen Access
    Nature Communications
    Volume: 14, P: 1-10