Nature Search

Surface remodeling and inversion of cell-matrix interactions underlie community recognition and dispersal in Vibrio cholerae biofilms

It is commonly assumed that bacterial cells within biofilms are glued together by matrix components, but the details are poorly understood. Here, Moreau et al. show how dynamic changes in attractive and repulsive interactions between cells and various matrix components drive biofilm growth and disassembly in Vibrio cholerae.

Alexis Moreau
Danh T. Nguyen
Jing Yan
ResearchOpen Access02 Jan 2025
Nature Communications

Volume: 16, P: 1-16
Prediction of DNA methylation-based tumor types from histopathology in central nervous system tumors with deep learning

A deep learning model is used to classify central nervous system tumors based on their DNA methylation profile directly from histopathology, and showed high accuracy in a large set of external validation cohorts, potentially informing downstream treatment.

Danh-Tai Hoang
Eldad D. Shulman
Kenneth Aldape
Research17 May 2024
Nature Medicine

Volume: 30, P: 1952-1961
CaMKII oxidation is a critical performance/disease trade-off acquired at the dawn of vertebrate evolution

Natural selection may favor traits underlying aging-related diseases if they benefit the young. Wang et al. find that oxidative activation of CaMKII provides physiological benefits critical to the initial and continued success of vertebrates but at the cost of disease, frailty, and shortened lifespan.

Qinchuan Wang
Erick O. Hernández-Ochoa
Mark E. Anderson
ResearchOpen Access26 May 2021
Nature Communications

Volume: 12, P: 1-17
Detection of neutralizing antibodies against multiple SARS-CoV-2 strains in dried blood spots using cell-free PCR

Neutralizing antibodies are critical for conferring immunity against SARS-CoV-2. Here, Dahn et al. report a PCR assay termed SONIA (Split-Oligonucleotide Neighboring Inhibition Assay) for measuring neutralizing antibodies against multiple SARS-CoV-2 strains in fingerprick dried blood spot samples.

Kenneth Danh
Donna Grace Karp
Cheng-ting Tsai
ResearchOpen Access21 Jul 2022
Nature Communications

Volume: 13, P: 1-8
Towards a consensus atlas of human and mouse adipose tissue at single-cell resolution

In this Review, the authors present a roadmap towards achieving consensus on development, analysis and interpretation of single-cell transcriptomics data in adipose tissue, including discussion of roadblocks, best practices and ideal cell-type markers for annotation of adipose tissue cell types in mice and humans.

Anne Loft
Margo P. Emont
Evan D. Rosen
Reviews13 May 2025
Nature Metabolism

Volume: 7, P: 875-894
Real-world graft utilization after CTN-1101: a registry-based analysis of haploidentical graft versus umbilical cord blood trends

Danh T. Tran
Ruyun Jin
Karen K. Ballen
ResearchOpen Access18 Aug 2025
Bone Marrow Transplantation

P: 1-8
Notch-independent RBPJ controls angiogenesis in the adult heart

Heart function after injury improves upon formation of new blood vessels. Here, the authors show that ablating a transcription factor RBPJ in the murine heart increases vascularization and maintains cardiac function after injury by increasing responsiveness to hypoxia, suggesting a new approach to treat heart injury.

Ramón Díaz-Trelles
Maria Cecilia Scimia
Mark Mercola
ResearchOpen Access30 Jun 2016
Nature Communications

Volume: 7, P: 1-10
De novo identification and biophysical characterization of transcription-factor binding sites with microfluidic affinity analysis

Fordyce et al. measure the sequence specificity and affinity of DNA-binding proteins using an improved microfluidic device. They characterize binding of 28 yeast transcription factors, several of which had proved intractable to previous approaches.

Polly M Fordyce
Doron Gerber
Stephen R Quake
Research29 Aug 2010
Nature Biotechnology

Volume: 28, P: 970-975
Mapping genomic and transcriptomic alterations spatially in epithelial cells adjacent to human breast carcinoma

Studying the spatial mutational and gene expression alterations in breast cancer could impact our understanding of breast cancer development. Here, the authors analyse a unique dataset of epithelial samples that highlight potential field cancerisation surrounding the primary tumour.

Moustafa Abdalla
Danh Tran-Thanh
Susan J. Done
ResearchOpen Access01 Nov 2017
Nature Communications

Volume: 8, P: 1-11
Small-island communities in the Philippines prefer local measures to relocation in response to sea-level rise

It is often assumed that increased flooding due to sea-level rise will lead to mass migration. However, this study shows that residents of island communities in the Philippines prefer to implement local adaptation measures in response to frequent severe flooding rather than relocate.

Ma. Laurice Jamero
Motoharu Onuki
Ven Paolo Valenzuela
Research24 Jul 2017
Nature Climate Change

Volume: 7, P: 581-586
Chronological expression and distribution of African swine fever virus p30 and p72 proteins in experimentally infected pigs

Taehwan Oh
Duy Tien Do
Chanhee Chae
ResearchOpen Access09 Mar 2022
Scientific Reports

Volume: 12, P: 1-10
A serological assay to detect SARS-CoV-2 antibodies in at-home collected finger-prick dried blood spots

Donna Grace Karp
Kenneth Danh
Cheng-ting Tsai
ResearchOpen Access19 Nov 2020
Scientific Reports

Volume: 10, P: 1-7
Controllable movement of single-photon source in multifunctional magneto-photonic structures

Thi Huong Au
Amber Perry
Ngoc Diep Lai
ResearchOpen Access16 Mar 2020
Scientific Reports

Volume: 10, P: 1-9
A Local Counter-Regulatory Motif Modulates the Global Phase of Hormonal Oscillations

Dong-Ho Park
Taegeun Song
Junghyo Jo
ResearchOpen Access09 May 2017
Scientific Reports

Volume: 7, P: 1-8
Scaling Law for Irreversible Entropy Production in Critical Systems

Danh-Tai Hoang
B. Prasanna Venkatesh
Mahn-Soo Choi
ResearchOpen Access09 Jun 2016
Scientific Reports

Volume: 6, P: 1-11
Tumour microbiomes and Fusobacterium genomics in Vietnamese colorectal cancer patients

Hoang N. H. Tran
Trang Nguyen Hoang Thu
Hao Chung The
ResearchOpen Access29 Oct 2022
npj Biofilms and Microbiomes

Volume: 8, P: 1-13
Purified Inactivated Zika Vaccine Candidates Afford Protection against Lethal Challenge in Mice

Whitney R. Baldwin
Jill A. Livengood
Hansi J. Dean
ResearchOpen Access07 Nov 2018
Scientific Reports

Volume: 8, P: 1-13
Breast Cancer Cell Invasion into a Three Dimensional Tumor-Stroma Microenvironment

Danh Truong
Julieann Puleo
Mehdi Nikkhah
ResearchOpen Access28 Sept 2016
Scientific Reports

Volume: 6, P: 1-18
Serum PCB concentrations in relation to locally produced food items in eastern Slovakia

Dean Sonneborn
Hye-Youn Park
Irva Hertz-Picciotto
Research20 Feb 2008
Journal of Exposure Science & Environmental Epidemiology

Volume: 18, P: 581-587

Search

Surface remodeling and inversion of cell-matrix interactions underlie community recognition and dispersal in Vibrio cholerae biofilms

Prediction of DNA methylation-based tumor types from histopathology in central nervous system tumors with deep learning

CaMKII oxidation is a critical performance/disease trade-off acquired at the dawn of vertebrate evolution

Detection of neutralizing antibodies against multiple SARS-CoV-2 strains in dried blood spots using cell-free PCR

Towards a consensus atlas of human and mouse adipose tissue at single-cell resolution

Real-world graft utilization after CTN-1101: a registry-based analysis of haploidentical graft versus umbilical cord blood trends

Notch-independent RBPJ controls angiogenesis in the adult heart

De novo identification and biophysical characterization of transcription-factor binding sites with microfluidic affinity analysis

Mapping genomic and transcriptomic alterations spatially in epithelial cells adjacent to human breast carcinoma

Small-island communities in the Philippines prefer local measures to relocation in response to sea-level rise

Chronological expression and distribution of African swine fever virus p30 and p72 proteins in experimentally infected pigs

A serological assay to detect SARS-CoV-2 antibodies in at-home collected finger-prick dried blood spots

Controllable movement of single-photon source in multifunctional magneto-photonic structures

A Local Counter-Regulatory Motif Modulates the Global Phase of Hormonal Oscillations

Scaling Law for Irreversible Entropy Production in Critical Systems

Tumour microbiomes and Fusobacterium genomics in Vietnamese colorectal cancer patients

Purified Inactivated Zika Vaccine Candidates Afford Protection against Lethal Challenge in Mice

Breast Cancer Cell Invasion into a Three Dimensional Tumor-Stroma Microenvironment

Serum PCB concentrations in relation to locally produced food items in eastern Slovakia

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