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Showing 1–50 of 121 results
Advanced filters: Author: Danielle R. Bond Clear advanced filters
  • Identification of a hyperstable boronate enables automated lego-like synthesis to access a wider range of three-dimensionally complex small organic molecules rich in Csp3–C bonds. 

    • Daniel J. Blair
    • Sriyankari Chitti
    • Martin D. Burke
    Research
    Nature
    Volume: 604, P: 92-97
  • Annunziato, Quan and Donckele et al. identify G3BP2 (Ras–GAP SH3 domain-binding protein 2) as a molecular glue-induced neosubstrate of the CRL4CRBN E3 ubiquitin ligase. The CRBN–glue neosurface uses a molecular surface mimicry mechanism to recruit and degrade G3BP2 in a compound-dependent manner.

    • Stefano Annunziato
    • Chao Quan
    • Georg Petzold
    ResearchOpen Access
    Nature Structural & Molecular Biology
    P: 1-9
  • Inteins can act as post-translational environmental sensors in vivo. Here the authors characterize two inteins present in the Mycobacterium smegmatis replicative helicase DnaB that display distinct splicing behaviors and are differentially sensitive to inhibition by biological stressors and propose that splicing inhibition could modulate DnaB levels to protect the cell against replication stress.

    • Danielle S. Kelley
    • Christopher W. Lennon
    • Marlene Belfort
    ResearchOpen Access
    Nature Communications
    Volume: 9, P: 1-15
  • Macrocycles are molecular structures extensively used in the design of catalysts, therapeutics and supramolecular assemblies but synthesis procedures that can produce macrocycles in high yield under high reaction concentrations are rare. Here the authors report the use of dynamic hindered urea bond for the construction of urea macrocycles with high efficiency.

    • Yingfeng Yang
    • Hanze Ying
    • Jianjun Cheng
    ResearchOpen Access
    Nature Communications
    Volume: 12, P: 1-10
  • Direct coupling of aliphatic C–H nucleophiles to aryl electrophiles is described, through the combination of light-driven polyoxometalate hydrogen atom transfer and nickel catalysis.

    • Ian B. Perry
    • Thomas F. Brewer
    • David W. C. MacMillan
    Research
    Nature
    Volume: 560, P: 70-75
  • The poor thermal conductance of interfaces is a significant bottleneck to the integration of nanoscale devices in a range of applications. Now, the thermal conductance at metal/dielectric heterointerfaces is significantly enhanced by the introduction of an organic nanomolecular monolayer.

    • Peter J. O’Brien
    • Sergei Shenogin
    • Ganpati Ramanath
    Research
    Nature Materials
    Volume: 12, P: 118-122
  • Despite the importance of trifluoromethylated compounds, direct catalytic methods for the conversion of C(sp3)–H bonds into the corresponding C(sp3)–CF3 analogues have remained elusive. This transformation has now been achieved by the merger of copper catalysis with decatungstate photocatalysis, enabling the C(sp3)–H trifluoromethylation of abundant feedstocks, natural products and pharmaceuticals.

    • Patrick J. Sarver
    • Vlad Bacauanu
    • David W. C. MacMillan
    Research
    Nature Chemistry
    Volume: 12, P: 459-467
  • Protein sequences from fossil tooth enamel of a rhinocerotid from Canada’s High Arctic are used to develop phylogenetic frameworks from a specimen too old to preserve ancient DNA.

    • Ryan S. Paterson
    • Meaghan Mackie
    • Enrico Cappellini
    ResearchOpen Access
    Nature
    Volume: 643, P: 719-724
  • Structural and functional analyses reveal how 9-O-acetyl sialic acid is recognized by the human coronavirus OC43 S glycoprotein and how this interaction promotes viral entry.

    • M. Alejandra Tortorici
    • Alexandra C. Walls
    • David Veesler
    Research
    Nature Structural & Molecular Biology
    Volume: 26, P: 481-489
  • A highly potent and selective small-molecule catalytic inhibitor of the protein lysine methyltransferase NSD2 shows therapeutic efficacy in preclinical models of KRAS-driven pancreatic cancer and lung cancer.

    • Jinho Jeong
    • Simone Hausmann
    • Or Gozani
    Research
    Nature
    Volume: 649, P: 205-215
  • Whole-genome sequencing, transcriptome-wide association and fine-mapping analyses in over 7,000 individuals with critical COVID-19 are used to identify 16 independent variants that are associated with severe illness in COVID-19.

    • Athanasios Kousathanas
    • Erola Pairo-Castineira
    • J. Kenneth Baillie
    ResearchOpen Access
    Nature
    Volume: 607, P: 97-103
  • A new biosynthetic core-forming enzyme, arginine cyclodipeptide synthase (RCDPS), was found to produce cyclo-arginine-Xaa dipeptides via a tRNA-dependent mechanism, and further genome mining using RCDPS as a beacon uncovered new natural products.

    • Danielle A. Yee
    • Kanji Niwa
    • Yi Tang
    Research
    Nature Chemical Biology
    Volume: 19, P: 633-640
  • Limited tumor cell delivery is a major challenge for the efficacious delivery of siRNAs to silence traditionally undruggable oncogenes. Here the authors optimize siRNAs for in situ binding to albumin through C18 lipid modifications and show the application of the lead conjugate structure for targeting MCL1 in orthotopic breast tumors in mice.

    • Ella N. Hoogenboezem
    • Shrusti S. Patel
    • Craig L. Duvall
    ResearchOpen Access
    Nature Communications
    Volume: 15, P: 1-20
  • Human ubiquitin E3 ligase E6AP contains a Zn-binding AZUL domain. Here the authors identify and name RAZUL, a domain in proteasome substrate receptor hRpn10 that binds AZUL, recruiting E6AP to proteasomes, and they present the NMR structure of the RAZUL:AZUL complex, which forms an intermolecular 4-helix bundle.

    • Gwen R. Buel
    • Xiang Chen
    • Kylie J. Walters
    ResearchOpen Access
    Nature Communications
    Volume: 11, P: 1-15
  • Modifications enhancing degradation resistance and albumin affinity enabled the delivery of an siRNA conjugate silencing MMP13 to guinea pig and murine arthritic joints, improving therapeutic outcomes following intravenous administration.

    • Juan M. Colazo
    • Megan C. Keech
    • Craig L. Duvall
    ResearchOpen Access
    Nature Biomedical Engineering
    Volume: 9, P: 1366-1383
  • Bond et al. show that inducible PolG mutation in muscle causes mtDNA damage and muscle wasting. This is driven by the integrated stress response (ISR) and reduction in folate intermediates, linking impaired folate metabolism with ISR/disease induction.

    • Simon T. Bond
    • Emily J. King
    • Brian G. Drew
    ResearchOpen Access
    Nature Communications
    Volume: 16, P: 1-21
  • Dural-associated lymphoid tissues are lymphoid structures around vascular hubs in the dura mater that sample antigens and rapidly support humoral immune responses after local pathogen challenge.

    • Zachary Fitzpatrick
    • Nagela Ghabdan Zanluqui
    • Dorian B. McGavern
    Research
    Nature
    Volume: 628, P: 612-619
  • Here, using clinical samples and autopsy tissues, the authors combine fast-colorimetric test (LAMP) for SARS-CoV-2 infection and large-scale shotgun metatranscriptomics for host, viral, and microbial profiling and provide a map of the viral genetic features of the New York City outbreak and associate specific host responses and gene expression perturbations with SARS-CoV-2 infection.

    • Daniel Butler
    • Christopher Mozsary
    • Christopher E. Mason
    ResearchOpen Access
    Nature Communications
    Volume: 12, P: 1-17
  • Itaconate is shown to non-covalently inhibit the antioxidant enzyme peroxiredoxin 5 in macrophages, thereby modulating the production of mitochondrial peroxide and enhancing the type I interferon production.

    • Tomas Paulenda
    • Barbora Echalar
    • Maxim N. Artyomov
    Research
    Nature Metabolism
    Volume: 7, P: 1183-1203
  • A set of GFP fusions with as few as 12 residues appended to the C terminus is shown to assemble into filaments in E. coli. Crystal structures reveal a mechanism termed ‘runaway domain coupling’ and illustrate how protein filament formation can evolve.

    • Laura McPartland
    • Danielle M. Heller
    • Michael R. Sawaya
    Research
    Nature Structural & Molecular Biology
    Volume: 25, P: 705-714
  • There is substantial interest in the development of base metal molecular catalysts for hydrogen generation. Here, the authors report a nitrosyl-containing diiron complex, and study its versatile electrochemical behaviour, which is due to the two unique iron sites and the redox active nitrosyl ligands.

    • Chung-Hung Hsieh
    • Shengda Ding
    • Marcetta Y. Darensbourg
    Research
    Nature Communications
    Volume: 5, P: 1-8
  • Ribofuranose residues are installed on O-antigens of bacterial polysaccharides by a dual-activity enzyme that uses phosphoribosyl-5-phospho-d-ribosyl-α-1-diphosphate as a sugar donor and also catalyzes phosphate hydrolysis.

    • Steven D. Kelly
    • Danielle M. Williams
    • Chris Whitfield
    Research
    Nature Chemical Biology
    Volume: 18, P: 530-537
  • JNJ-9676—a small-molecule inhibitor targeting coronavirus M protein that shows excellent efficacy in Syrian golden hamster models—binds to and stabilizes the M protein dimer in an altered conformational state between its long and short forms, preventing the release of infectious virus.

    • Ellen Van Damme
    • Pravien Abeywickrema
    • Marnix Van Loock
    ResearchOpen Access
    Nature
    Volume: 640, P: 506-513
  • There is a great need for inexpensive and sensitive tests to measure HIV viral load in patients’ samples. Here, Zhao et al. describe a cost-effective colorimetric method based on synthetic peptide nucleic acids that quantifies HIV RNA molecules from infected patients’ plasma.

    • Chao Zhao
    • Travis Hoppe
    • Daniel H. Appella
    Research
    Nature Communications
    Volume: 5, P: 1-9
  • Single-nucleus and single-cell RNA sequencing plus spatial profiling with four methods of core biopsies from 60 patients with metastatic breast cancer reveal patient-specific gene expression programs of breast cancer metastases that are maintained across time, site of metastasis and spatial profiling method, with spatial phenotypes correlating with microenvironmental features.

    • Johanna Klughammer
    • Daniel L. Abravanel
    • Nikhil Wagle
    ResearchOpen Access
    Nature Medicine
    Volume: 30, P: 3236-3249
  • The cellular mechanisms underlying autophagy are conserved; however it is unclear how they evolved in higher organisms. Here the authors identify two oxidation-sensitive cysteine residues in the autophagy receptor SQSTM1/p62 in vertebrates which allow activation of pro-survival autophagy in stress conditions.

    • Bernadette Carroll
    • Elsje G. Otten
    • Viktor I. Korolchuk
    ResearchOpen Access
    Nature Communications
    Volume: 9, P: 1-11
  • Directed evolution of the ribosome is challenging because the requirement of cell viability limits the mutations that can be made. Here the authors develop a platform for in vitro ribosome synthesis and evolution (RISE) to overcome these constraints.

    • Michael J. Hammerling
    • Brian R. Fritz
    • Michael C. Jewett
    ResearchOpen Access
    Nature Communications
    Volume: 11, P: 1-10
  • The authors study (Bi,Sb)2Te3/FeTe bilayers, which feature emergent superconductivity at the interface with Tc ~ 12 K. Through angle-resolved photoemission spectroscopy and electrical transport measurements, they argue that the Dirac-fermion-mediated Ruderman-Kittel-Kasuya-Yosida-type interaction weakens antiferromagnetic order in FeTe layer, allowing for superconductivity.

    • Hemian Yi
    • Lun-Hui Hu
    • Cui-Zu Chang
    ResearchOpen Access
    Nature Communications
    Volume: 14, P: 1-9
  • In patients with DNA damage response-deficient solid tumors, the oral ATR kinase inhibitor camonsertib was well tolerated; a recommended phase 2 dose was identified; and encouraging anti-tumor activity was observed, with the highest response rate observed in patients with ovarian cancer.

    • Timothy A. Yap
    • Elisa Fontana
    • Ezra Rosen
    ResearchOpen Access
    Nature Medicine
    Volume: 29, P: 1400-1411
  • The facile release of corrosive HCl gas and plasticizers from poly(vinyl chloride) (PVC) makes it a challenging material to recycle. Now, it has been shown that PVC waste can be directly used as a halogen source to synthesize chloroarenes. This paired electro(de)chlorination is mediated by a phthalate plasticizer already contained in PVC waste.

    • Danielle E. Fagnani
    • Dukhan Kim
    • Anne J. McNeil
    Research
    Nature Chemistry
    Volume: 15, P: 222-229
  • The electronic structures of photoactive proteins underlie many natural photoinduced processes. The authors, using UV liquid-microjet photoelectron spectroscopy and quantum chemistry calculations, determine electron detachment energies of the green fluorescent protein chromophore in aqueous solution, approaching conditions of the protein environment.

    • Omri Tau
    • Alice Henley
    • Helen H. Fielding
    ResearchOpen Access
    Nature Communications
    Volume: 13, P: 1-7
  • Osteoporosis and bone disease are common in patients with systemic mastocytosis. Here, the authors show that extracellular vesicles released by neoplastic mast cells of the patients block osteoblast differentiation and bone mineralization when injected into mice, via a mechanism involving suppression of osteogenic factors via miRNA-30a and miRNA-23a.

    • Do-Kyun Kim
    • Geethani Bandara
    • Ana Olivera
    ResearchOpen Access
    Nature Communications
    Volume: 12, P: 1-18
  • A study using a mouse solid tumour model suggests that adjusting the dosing frequency of the PI3Kδ inhibitor AMG319 in the treatment of human cancers could decrease tumour growth with fewer adverse effects.

    • Simon Eschweiler
    • Ciro Ramírez-Suástegui
    • Christian H. Ottensmeier
    ResearchOpen Access
    Nature
    Volume: 605, P: 741-746
  • How the 22q11.2 deletion predisposes to psychiatric disease is unclear. Here, the authors examine living human neuronal cells and show that 22q11.2 regulates the expression of genes linked to autism during early development, and genes linked to schizophrenia and synaptic biology in neurons.

    • Ralda Nehme
    • Olli Pietiläinen
    • Kevin Eggan
    ResearchOpen Access
    Nature Communications
    Volume: 13, P: 1-21
  • Mineral weathering and microbial priming are two important processes that regulate soil formation and CO2 emissions. Here the authors link weathering with primed organic matter decomposition, which plays a key role in controlling soil C dynamics.

    • Qian Fang
    • Anhuai Lu
    • Jon Chorover
    ResearchOpen Access
    Nature Communications
    Volume: 14, P: 1-14
  • Antibody discovery is bottlenecked by the individual expression and evaluation of antigen specific hits. Here, the authors build an antibody screening workflow leveraging cell-free protein synthesis that enables expression and evaluation of hundreds of antibody fragments in less than 24 h.

    • Andrew C. Hunt
    • Bastian Vögeli
    • Michael C. Jewett
    ResearchOpen Access
    Nature Communications
    Volume: 14, P: 1-14
  • The immune synapse promotes cellular information exchange but the role of biophysical forces in synapse function is unclear. Here, the authors show that B cells exert two types of forces, a centripetal myosin II-driven force and a central actin protrusive force at the site of antigen extraction.

    • Anita Kumari
    • Judith Pineau
    • Paolo Pierobon
    ResearchOpen Access
    Nature Communications
    Volume: 10, P: 1-14
  • A bottom-up mathematical approach provides a framework for the design of mechanical networks of two- or three-dimensional frames composed of freely rotating rods and springs that achieve any desired coordinate motion.

    • Jason Z. Kim
    • Zhixin Lu
    • Danielle S. Bassett
    Research
    Nature Physics
    Volume: 15, P: 714-720