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Showing 51–100 of 128 results
Advanced filters: Author: Evan R Williams Clear advanced filters
  • An exome-wide association study of six smoking phenotypes in up to 749,459 individuals identifies associations of rare coding variants in CHRNB2 that may reduce the likelihood of smoking.

    • Veera M. Rajagopal
    • Kyoko Watanabe
    • Giovanni Coppola
    ResearchOpen Access
    Nature Genetics
    Volume: 55, P: 1138-1148
  • MYC is an iconic oncogene that has been at the forefront of cancer research since its discovery. Looking back over the history of MYC research provides us with a framework with which to progress in the next 25 years, as outlined in this Timeline.

    • Natalie Meyer
    • Linda Z. Penn
    Reviews
    Nature Reviews Cancer
    Volume: 8, P: 976-990
  • Comparisons within the human pangenome establish that homologous regions on short arms of heterologous human acrocentric chromosomes actively recombine, leading to the high rate of Robertsonian translocation breakpoints in these regions.

    • Andrea Guarracino
    • Silvia Buonaiuto
    • Erik Garrison
    ResearchOpen Access
    Nature
    Volume: 617, P: 335-343
  • Temporal multi-omic analysis of tissues from rats undergoing up to eight weeks of endurance exercise training reveals widespread shared, tissue-specific and sex-specific changes, including immune, metabolic, stress response and mitochondrial pathways.

    • David Amar
    • Nicole R. Gay
    • Elena Volpi
    ResearchOpen Access
    Nature
    Volume: 629, P: 174-183
  • The innate sensors of SARS-CoV-2 are still being determined. Kanneganti and colleagues find that SARS-CoV-2 envelope protein is sensed by TLR2 and this drives pathogenic inflammatory cytokine production.

    • Min Zheng
    • Rajendra Karki
    • Thirumala-Devi Kanneganti
    Research
    Nature Immunology
    Volume: 22, P: 829-838
  • Comprehensive integration of gene expression with epigenetic features is needed to understand the transition of kidney cells from health to injury. Here, the authors integrate dual single nucleus RNA expression and chromatin accessibility, DNA methylation, and histone modifications to decipher the chromatin landscape of the kidney in reference and adaptive injury cell states, identifying a transcription factor network of ELF3, KLF6, and KLF10 which regulates adaptive repair and maladaptive failed repair.

    • Debora L. Gisch
    • Michelle Brennan
    • Michael T. Eadon
    ResearchOpen Access
    Nature Communications
    Volume: 15, P: 1-21
  • Developmental disorders (DDs) are more prevalent in males, thought to be due to X-linked genetic variation. Here, the authors investigate the burden of X-linked coding variants in 11,044 DD patients, showing that this contributes to ~6% of both male and female cases and therefore does not solely explain male bias in DDs.

    • Hilary C. Martin
    • Eugene J. Gardner
    • Matthew E. Hurles
    ResearchOpen Access
    Nature Communications
    Volume: 12, P: 1-13
  • Ultrasound neuromodulation overcomes limitations of electrode-based stimulation through improved

    targeting and long-term stability for treating neurological disorders. Here, authors present a hair-thin, implantable piezoelectric stimulator that selectively modulates neurons in the deep brain.

    • Jason F. Hou
    • Md Osman Goni Nayeem
    • Canan Dagdeviren
    ResearchOpen Access
    Nature Communications
    Volume: 15, P: 1-15
  • Laser microdissection and microarrays are used to assess 900 precise subdivisions of the brains from three healthy men with 60,000 gene expression probes; the resulting atlas allows comparisons between humans and other animals, and will facilitate studies of human neurological and psychiatric diseases.

    • Michael J. Hawrylycz
    • Ed S. Lein
    • Allan R. Jones
    Research
    Nature
    Volume: 489, P: 391-399
  • Durable agonism of NPR1 achieved with a novel investigational monoclonal antibody could mirror the positive hemodynamic changes in blood pressure and heart failure identified in humans with lifelong exposure to NPR1 coding variants.

    • Michael E. Dunn
    • Aaron Kithcart
    • Lori Morton
    ResearchOpen Access
    Nature
    Volume: 633, P: 654-661
  • The goal of the 1000 Genomes Project is to provide in-depth information on variation in human genome sequences. In the pilot phase reported here, different strategies for genome-wide sequencing, using high-throughput sequencing platforms, were developed and compared. The resulting data set includes more than 95% of the currently accessible variants found in any individual, and can be used to inform association and functional studies.

    • Richard M. Durbin
    • David Altshuler (Co-Chair)
    • Gil A. McVean
    ResearchOpen Access
    Nature
    Volume: 467, P: 1061-1073
  • Ion-selective membranes are widely used for water purification and electrochemical energy devices but designing their pore architectures is challenging. Membranes with narrow channels and hydrophilic functionality are shown to exhibit salt ions transport and selectivity towards small organic molecules.

    • Rui Tan
    • Anqi Wang
    • Qilei Song
    Research
    Nature Materials
    Volume: 19, P: 195-202
  • Whole-genome sequencing analysis of individuals with primary immunodeficiency identifies new candidate disease-associated genes and shows how the interplay between genetic variants can explain the variable penetrance and complexity of the disease.

    • James E. D. Thaventhiran
    • Hana Lango Allen
    • Kenneth G. C. Smith
    Research
    Nature
    Volume: 583, P: 90-95
  • The BRAIN Initiative Cell Census Network has constructed a multimodal cell census and atlas of the mammalian primary motor cortex in a landmark effort towards understanding brain cell-type diversity, neural circuit organization and brain function.

    • Edward M. Callaway
    • Hong-Wei Dong
    • Susan Sunkin
    ResearchOpen Access
    Nature
    Volume: 598, P: 86-102
  • Genetic variants in ionotropic glutamate receptors have been implicated in neurodevelopmental disorders. Here, the authors report heterozygous de novo mutations in the GRIA2 gene in 28 individuals with intellectual disability and neurodevelopmental abnormalities associated with reduced Ca2+ transport and AMPAR currents.”

    • Vincenzo Salpietro
    • Christine L. Dixon
    • Henry Houlden
    ResearchOpen Access
    Nature Communications
    Volume: 10, P: 1-16
  • Genome sequencing and phylogenomic analysis show that the lungfish, not the coelacanth, is the closest living relative of tetrapods, that coelacanth protein-coding genes are more slowly evolving than those of tetrapods and lungfish, and that the genes and regulatory elements that underwent changes during the vertebrate transition to land reflect adaptation to a new environment.

    • Chris T. Amemiya
    • Jessica Alföldi
    • Kerstin Lindblad-Toh
    ResearchOpen Access
    Nature
    Volume: 496, P: 311-316
  • Circulating liver enzymes, like alanine aminotransferase (ALT) and aspartate aminotransferase (AST), are highly heritable and predictive of disease. Here, the authors perform a genome-wide association study on ALT and AST, revealing a rare variant in SLC30A10 associated with elevated ALT and AST.

    • Lucas D. Ward
    • Ho-Chou Tu
    • Paul Nioi
    ResearchOpen Access
    Nature Communications
    Volume: 12, P: 1-14
  • The Mouse ENCODE Consortium has mapped transcription, DNase I hypersensitivity, transcription factor binding, chromatin modifications and replication domains throughout the mouse genome in diverse cell and tissue types; these data were compared with those from human to confirm substantial conservation in the newly annotated potential functional sequences and to reveal pronounced divergence of other sequences involved in transcriptional regulation, chromatin state and higher order chromatin organization.

    • Feng Yue
    • Yong Cheng
    • Bing Ren
    ResearchOpen Access
    Nature
    Volume: 515, P: 355-364
  • Trisomy 21 (T21) is a major cause of Down syndrome but little is known about its impact on the cellular proteome. Here, the authors define the proteome of T21 fibroblasts and its turnover and also map proteomic differences in monozygotic T21-discordant twins, revealing extensive, organelle-specific changes caused by T21.

    • Yansheng Liu
    • Christelle Borel
    • Ruedi Aebersold
    ResearchOpen Access
    Nature Communications
    Volume: 8, P: 1-15
  • The anthrax lethal toxin protein transporter consists of protective antigen (PA) and lethal factor (LF), with LF unfolding for translocation into the host cell. Structural and functional analyses now indicate how each of four LFs unfolds and binds into amphipathic clefts on the surface of the PA octomer.

    • Geoffrey K Feld
    • Katie L Thoren
    • Bryan A Krantz
    Research
    Nature Structural & Molecular Biology
    Volume: 17, P: 1383-1390
  • The genome of the gibbon, a tree-dwelling ape from Asia positioned between Old World monkeys and the great apes, is presented, providing insights into the evolutionary history of gibbon species and their accelerated karyotypes, as well as evidence for selection of genes such as those for forelimb development and connective tissue that may be important for locomotion through trees.

    • Lucia Carbone
    • R. Alan Harris
    • Richard A. Gibbs
    ResearchOpen Access
    Nature
    Volume: 513, P: 195-201
  • Here, the first genome-wide in vivo RNA interference screens in a mammalian animal model are reported: genes involved in normal and abnormal epithelial cell growth are studied in developing skin tissue in mouse embryos, and among the findings, β-catenin is shown to act as an antagonist to normal epithelial cell growth as well as promoting oncogene-driven growth.

    • Slobodan Beronja
    • Peter Janki
    • Elaine Fuchs
    Research
    Nature
    Volume: 501, P: 185-190
  • The authors use modelling to show that the network of trading routes known as the Silk Road emerged from hundreds of years of interactions between pastoralists as they moved their herds and flocks between higher and lower elevations in generally mountainous regions.

    • Michael D. Frachetti
    • C. Evan Smith
    • Tim Williams
    Research
    Nature
    Volume: 543, P: 193-198
  • The Impact of Genomic Variation on Function Consortium is combining single-cell mapping, genomic perturbations and predictive modelling to investigate relationships between human genomic variation, genome function and phenotypes and will provide an open resource to the community.

    • Jesse M. Engreitz
    • Heather A. Lawson
    • Ella K. Samer
    Reviews
    Nature
    Volume: 633, P: 47-57
  • Planar cell polarity (PCP) directs the orientation of mammalian epithelial cells in the skin but it is unclear how polarity is preserved during division. A dileucine motif in the atypical cadherin Celsr1 is shown to trigger the endocytosis of PCP components in mitosis to ensure that they are distributed equally to daughter cells and recycled back to the plasma membrane after division.

    • Danelle Devenport
    • Daniel Oristian
    • Elaine Fuchs
    Research
    Nature Cell Biology
    Volume: 13, P: 893-902
  • Despite large numbers of patients being affected by stones, a surprising lack of knowledge exists on the relevance of stone compositions and pathological features to the outcomes of patients with stones. Here authors describe the potential of new technologies such as high-resolution endoscopes, and micro-CT imaging to address this lack of knowledge.

    • Michael S. Borofsky
    • Casey A. Dauw
    • James E. Lingeman
    Reviews
    Nature Reviews Urology
    Volume: 13, P: 549-557
  • Rapid assessment of xenobiotic molecules is crucial due to their potential health risks. Here, the authors employ drift tube ion mobility spectrometry-mass spectrometry (IMS-MS) to analyse 2144 xenobiotic standards, creating a comprehensive database that enhances screening capabilities and accelerates exposure response.

    • Devin Teri
    • Noor A. Aly
    • Erin S. Baker
    ResearchOpen Access
    Communications Chemistry
    Volume: 8, P: 1-9
  • Ruthenium oxide has attracted recent interest as a non-superconducting material where superconductivity can be induced by epitaxial strain. Here, the authors explore strained (100)-oriented RuO2 films on TiO2(100) substrate and reveal strain-induced superconductivity similarly to strained RuO2(110) films, providing insights into the thickness-dependence and electronic structure mechanisms of superconductivity.

    • Neha Wadehra
    • Benjamin Z. Gregory
    • Darrell G. Schlom
    ResearchOpen Access
    Communications Materials
    Volume: 6, P: 1-9
  • Analytes can be ionized and brought into the gas phase using electrospray ionization (ESI). Coupling ESI with mass spectrometry enables a wide range of molecules to be studied, including proteins and polymers. This Primer introduces the ESI method, describing the underlying mechanism, common variants and instrument setups.

    • Gurpur Rakesh D. Prabhu
    • Evan R. Williams
    • Pawel L. Urban
    Reviews
    Nature Reviews Methods Primers
    Volume: 3, P: 1-22
  • The Paris Agreement highlights the need for local climate leadership. The University Of California’s approach to deep decarbonization offers lessons in efficiency, alternative fuels and electrification. Bending the emissions curve globally requires efforts that blend academic insights with practical solutions.

    • David G. Victor
    • Ahmed Abdulla
    • Jim Williams
    Comments & Opinion
    Nature Climate Change
    Volume: 8, P: 183-185